evm.TU.supercontig_6.98 (Carica papaya)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 evm.TU.supercontig_6.98 T287172_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB73
M07114_2.00 		Arabidopsis thaliana
TAACBGWHWHW
WDWDWCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB73_col_a 		0.878 0.957
AtMYB70
M01071_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH8588 		0.875 0.946
AtMYB70
M07048_2.00 		Arabidopsis thaliana
YAACBGWHWWAAMN
NKTTWWDWCVGTTR		 Dap-seq
OMalley et al.(2016)
MYB70_col_a 		0.875 0.946
PK28565.1
M02357_2.00 		Cannabis sativa
TAACBGTY
RACVGTTA		 PBM
Weirauch et al.(2014)
pTH9653 		0.866 0.946
MYB44
M01082_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH7078 		0.816 0.882
MYB44
M07155_2.00 		Arabidopsis thaliana
HDTAACBGWHW
WDWCVGTTAHD		 Dap-seq
OMalley et al.(2016)
MYB44_colamp_a 		0.816 0.882
MYB44
M07156_2.00 		Arabidopsis thaliana
HAACBRWHWWAACBGHHWH
DWDDCVGTTWWDWYVGTTD		 Dap-seq
OMalley et al.(2016)
MYB44_col 		0.816 0.882
F3A4.140
M02299_2.00 		Arabidopsis thaliana
YAACBGYY
RRCVGTTR		 PBM
Weirauch et al.(2014)
pTH7112 		0.756 0.839
F3A4.140
M07095_2.00 		Arabidopsis thaliana
TAACBGYHWHNNHNN
NNDNNDWDRCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB77_col_a 		0.756 0.839
F3A4.140
M07096_2.00 		Arabidopsis thaliana
AACCGYAACCSTAWHWWAMV
BKTWWDWTASGGTTRCGGTT		 Dap-seq
OMalley et al.(2016)
MYB77_colamp_a 		0.756 0.839
F3A4.140
M02701_2.00 		Arabidopsis thaliana
SYAACYGYCVHBN
NVDBGRCRGTTRS		 SELEX
Mathelier et al.(2014)
MA0575.1 		0.756 0.839
F3A4.140
M11044_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB77_01 		0.756 0.839
PK07741.1
M01277_2.00 		Cannabis sativa
HAMCBRHHN
NDDYVGKTD		 PBM
Lambert et al.(2019)
pTH11469 		0.680 0.774
OS02G0187700
M02327_2.00 		Oryza sativa
NTAMCKGTHN
NDACMGKTAN		 PBM
Weirauch et al.(2014)
pTH8645 		0.678 0.774
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_6.98 Myb 12 58
evm.model.supercontig_6.98 Myb 64 109

Links

Other Myb/SANT family TFs
Other Carica papaya TFs

318 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000018236 Ailuropoda melanoleuca ENSAMEG00000018236 I 0.000
ENSAMXG00000004647 Astyanax mexicanus ENSAMXG00000004647 I 0.000
ENSP00000295025-D1 Bos grunniens ENSP00000295025-D1 I 0.000
REL Bos taurus ENSBTAG00000015386 I 0.000
Brh_R000963 Buceros rhinoceros Brh_R000963 I 0.000
REL Callithrix jacchus ENSCJAG00000008975 I 0.000
REL Canis familiaris ENSCAFG00000002981 I 0.000
Cmyd_10008594 Chelonia mydas Cmyd_10008594 I 0.000
ENSCHOG00000004207 Choloepus hoffmanni ENSCHOG00000004207 I 0.000
REL Choloepus hoffmanni ENSCHOG00000010935 I 0.000
rel Danio rerio ENSDARG00000055276 I 0.000
ENSETEG00000002607 Echinops telfairi ENSETEG00000002607 I 0.000
REL Equus caballus ENSECAG00000003277 I 0.000
REL Felis catus ENSFCAG00000008018 I 0.000
ENSFALG00000011066 Ficedula albicollis ENSFALG00000011066 I 0.000
ENSGMOG00000018800 Gadus morhua ENSGMOG00000018800 I 0.000
REL Gallus gallus ENSGALG00000007845 I 0.000
REL Gorilla gorilla ENSGGOG00000024826 I 0.000
RELA Homo sapiens ENSG00000173039 D 0.000
REL Homo sapiens ENSG00000162924 D 0.000
ENSSTOG00000005785 Ictidomys tridecemlineatus ENSSTOG00000005785 I 0.000
ENSLACG00000008544 Latimeria chalumnae ENSLACG00000008544 I 0.000
ENSLOCG00000016127 Lepisosteus oculatus ENSLOCG00000016127 I 0.000
ENSMMUP00000014199 Macaca fascicularis ENSMMUP00000014199 I 0.000
REL Macaca mulatta ENSMMUG00000010834 I 0.000
REL Meleagris gallopavo ENSMGAG00000001721 I 0.000
REL Microcebus murinus ENSMICG00000010062 I 0.000
REL Monodelphis domestica ENSMODG00000002172 I 0.000
ENSMPUG00000005180 Mustela putorius furo ENSMPUG00000005180 I 0.000
Rel Mus musculus ENSMUSG00000020275 D 0.000
Myotis_brandtii_REL_10034307 Myotis brandtii Myotis_brandtii_REL_10034307 I 0.000
REL Myotis lucifugus ENSMLUG00000007454 I 0.000
ENSNLEG00000009519 Nomascus leucogenys ENSNLEG00000009519 I 0.000
ENSONIG00000002983 Oreochromis niloticus ENSONIG00000002983 I 0.000
REL Ornithorhynchus anatinus ENSOANG00000012405 I 0.000
REL Oryctolagus cuniculus ENSOCUG00000004968 I 0.000
REL Otolemur garnettii ENSOGAG00000013722 I 0.000
ENSOARG00000001457 Ovis aries ENSOARG00000001457 I 0.000
REL Pan troglodytes ENSPTRG00000011949 I 0.000
ENSPANG00000006148 Papio anubis ENSPANG00000006148 I 0.000
ENSPSIG00000013860 Pelodiscus sinensis ENSPSIG00000013860 I 0.000
ENSPFOG00000013038 Poecilia formosa ENSPFOG00000013038 I 0.000
Pvit_04537 Pogona vitticeps Pvit_04537 I 0.000
ENSPPYG00000012391 Pongo abelii ENSPPYG00000012391 I 0.000
REL Pteropus vampyrus ENSPVAG00000000364 I 0.000
Rel Rattus norvegicus ENSRNOG00000054437 I 0.000
REL Sus scrofa ENSSSCG00000008388 I 0.000
ENSTRUG00000006394 Takifugu rubripes ENSTRUG00000006394 I 0.000
ENSTSYG00000012918 Tarsius syrichta ENSTSYG00000012918 I 0.000
ENSTNIG00000017107 Tetraodon nigroviridis ENSTNIG00000017107 N 0.000
RELA Tupaia belangeri ENSTBEG00000004751 I 0.000
Tal_R011178 Tyto alba Tal_R011178 I 0.000
REL Vicugna pacos ENSVPAG00000000493 I 0.000
rel.S Xenopus laevis XB-GENE-17342653 I 0.000
rel.L Xenopus laevis XB-GENE-993266 I 0.000
rel Xenopus tropicalis XB-GENE-993262 I 0.000
ENSXMAG00000007379 Xiphophorus maculatus ENSXMAG00000007379 I 0.000