gene05581-v1.0-hybrid (Fragaria vesca)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 gene05581-v1.0-hybrid T287248_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAX3
M02700_2.00 		Arabidopsis thaliana
SCACCTACCHCCN
NGGDGGTAGGTGS		 SELEX
Mathelier et al.(2014)
MA0576.1 		0.849 0.935
RAX3
M11043_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB84_01 		0.849 0.935
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna05581.1-v1.0-hybrid Myb 14 62
mrna05581.1-v1.0-hybrid Myb 68 113

Links

Other Myb/SANT family TFs
Other Fragaria vesca TFs

481 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action