Lus10033003.g (Linum usitatissimum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Lus10033003.g T288149_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB106
M11040_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT3G01140_01 		0.888 0.946
MYB107
M07061_2.00 		Arabidopsis thaliana
NDDWDBBYYACCWAMYHH
DDRKTWGGTRRVVHWHHN		 Dap-seq
OMalley et al.(2016)
MYB107_col_a 		0.776 0.785
MYB107
M07062_2.00 		Arabidopsis thaliana
WNBYYYACCWAMYH
DRKTWGGTRRRVNW		 Dap-seq
OMalley et al.(2016)
MYB107_colamp_a 		0.776 0.785
AtMYB93
M07020_2.00 		Arabidopsis thaliana
HDNYYYAMCWAMYHHHHHHHH
DDDDDDDDRKTWGKTRRRNHD		 Dap-seq
OMalley et al.(2016)
MYB93_col_a 		0.752 0.796
AtMYB93
M07021_2.00 		Arabidopsis thaliana
NNHNBYYYAMCWAMY
RKTWGKTRRRVNDNN		 Dap-seq
OMalley et al.(2016)
MYB93_colamp_a 		0.752 0.796
MYB92
M07123_2.00 		Arabidopsis thaliana
NHHACCTAMY
RKTAGGTDDN		 Dap-seq
OMalley et al.(2016)
MYB92_100ng20cy_b 		0.736 0.731
MYB92
M07124_2.00 		Arabidopsis thaliana
NNNNWNNYYYACCWAMYHH
DDRKTWGGTRRRNNWNNNN		 Dap-seq
OMalley et al.(2016)
MYB92_colamp_a 		0.736 0.731
MYB39
M07106_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHH
DDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB39_col_a 		0.718 0.774
MYB39
M07107_2.00 		Arabidopsis thaliana
NYYYACCWAMYWHHHHHHHNH
DNDDDDDDDWRKTWGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB39_colamp_a 		0.718 0.774
MYB49
M07140_2.00 		Arabidopsis thaliana
HDBBYYACCWAMYWH
DWRKTWGGTRRVVHD		 Dap-seq
OMalley et al.(2016)
MYB49_col_a 		0.704 0.796
MYB49
M07141_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHN
NDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB49_colamp_a 		0.704 0.796
AtMYB17
M07099_2.00 		Arabidopsis thaliana
YYYACCWACCWHHHH
DDDDWGGTWGGTRRR		 Dap-seq
OMalley et al.(2016)
MYB17_colamp_a 		0.675 0.753
ATMYB13
M06999_2.00 		Arabidopsis thaliana
HYCACCWACCHHHNH
DNDDDGGTWGGTGRD		 Dap-seq
OMalley et al.(2016)
MYB13_col_a 		0.666 0.710
ATMYB13
M07000_2.00 		Arabidopsis thaliana
BYCACCWACCHHHNNHNN
NNDNNDDDGGTWGGTGRV		 Dap-seq
OMalley et al.(2016)
MYB13_colamp_a 		0.666 0.710
PK28187.1
M01286_2.00 		Cannabis sativa
TACCTACC
GGTAGGTA		 PBM
Lambert et al.(2019)
pTH11305 		0.662 0.774
AtMYB74
M07104_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHH
DDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB74_colamp_a 		0.662 0.763
AtMYB74
M07105_2.00 		Arabidopsis thaliana
BYHYACCTAMYHHH
DDDRKTAGGTRDRV		 Dap-seq
OMalley et al.(2016)
MYB74_col 		0.662 0.763
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10033003 Myb 14 61
Lus10033003 Myb 67 112

Links

Other Myb/SANT family TFs
Other Linum usitatissimum TFs

666 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI003697 Acyrthosiphon pisum ACYPI003697 N
AAEL004097 Aedes aegypti AAEL004097 N
AALB009972 Anopheles albimanus AALB009972 N
AARA003420 Anopheles arabiensis AARA003420 N
AATE003836 Anopheles atroparvus AATE003836 N
ACHR005166 Anopheles christyi ACHR005166 N
ACOM026226 Anopheles coluzzii ACOM026226 N
ACUA018116 Anopheles culicifacies ACUA018116 N
ADAC001260 Anopheles darlingi ADAC001260 N
ADIR000502 Anopheles dirus ADIR000502 N
AFAF001212 Anopheles farauti AFAF001212 N
AFUN009606 Anopheles funestus AFUN009606 N
AGAP012342 Anopheles gambiae AGAP012342 N
AMAM003031 Anopheles maculatus AMAM003031 N
AMEC021898 Anopheles melas AMEC021898 N
AMEM007635 Anopheles merus AMEM007635 N
AMIN009356 Anopheles minimus AMIN009356 N
AQUA002997 Anopheles quadriannulatus AQUA002997 N
ASTEI02368 Anopheles stephensi ASTEI02368 N
GB43778 Apis mellifera GB43778 N
GB43788 Apis mellifera GB43788 N
ACEP15314 Atta cephalotes ACEP15314 N
ACEP15313 Atta cephalotes ACEP15313 N
ACEP15330 Atta cephalotes ACEP15330 N
BGIBMGA008915 Bombyx mori BGIBMGA008915 N
BGIBMGA008965 Bombyx mori BGIBMGA008965 N
Cflo_09321--XP_393312.1_APIME Camponotus floridanus Cflo_09321--XP_393312.1_APIME N
Cflo_06471--XP_001120327.1_APIME Camponotus floridanus Cflo_06471--XP_001120327.1_APIME N
CLEC002260 Cimex lectularius CLEC002260 N
CLEC002262 Cimex lectularius CLEC002262 N
CpipJ_CPIJ003409 Culex pipiens CpipJ_CPIJ003409 N
CPIJ003409 Culex quinquefasciatus CPIJ003409 N
KGM_14329 Danaus plexippus KGM_14329 N
KGM_04455 Danaus plexippus KGM_04455 N
DAPPUDRAFT_64307 Daphnia pulex DAPPUDRAFT_64307 N
DAPPUDRAFT_299514 Daphnia pulex DAPPUDRAFT_299514 N
YQE_12730 Dendroctonus ponderosae YQE_12730 N
YQE_12733 Dendroctonus ponderosae YQE_12733 N
HHAL003217-PA Halyomorpha halys HHAL003217-PA N
Hsal_08385--XP_001120327.1_APIME Harpegnathos saltator Hsal_08385--XP_001120327.1_APIME N
Hsal_08372--XP_393312.1_APIME Harpegnathos saltator Hsal_08372--XP_393312.1_APIME N
HMEL008302 Heliconius melpomene HMEL008302 N
HMEL013921 Heliconius melpomene HMEL013921 N
LDEC006635 Leptinotarsa decemlineata LDEC006635 N
LDEC015408 Leptinotarsa decemlineata LDEC015408 N
LLOJ009833 Lutzomyia longipalpis LLOJ009833 N
LLOJ005066 Lutzomyia longipalpis LLOJ005066 N
MCINX007973 Melitaea cinxia MCINX007973 N
PHUM375930 Pediculus humanus PHUM375930 N
PHUM375920 Pediculus humanus PHUM375920 N
PPAI000981 Phlebotomus papatasi PPAI000981 N
RPRC006229 Rhodnius prolixus RPRC006229 N
SINV15880 Solenopsis invicta SINV15880 N
SINV15898 Solenopsis invicta SINV15898 N
TC005541 Tribolium castaneum TC005541 N
TC006580 Tribolium castaneum TC006580 N
L798_10928 Zootermopsis nevadensis L798_10928 I
L798_10924 Zootermopsis nevadensis L798_10924 I