Lus10034133.g (Linum usitatissimum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Lus10034133.g T288159_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CDC5
M02698_2.00 		Arabidopsis thaliana
NVCGCTGAGBN
NVCTCAGCGBN		 SELEX
Mathelier et al.(2014)
MA0579.1 		0.909 0.989
CDC5
M11037_2.00 		Arabidopsis thaliana
NVCGCTGAGBN
NVCTCAGCGBN		 Transfac
Matys et al.(2006)
P$CDC5_01 		0.909 0.989
CDC5L
M11049_2.00 		Homo sapiens
GWKTTAAYRTAD
HTAYRTTAAMWC		 Transfac
Matys et al.(2006)
V$CDC5_01 		0.814 0.880
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10034133 Myb 7 53
Lus10034133 Myb 59 103

Links

Other Myb/SANT family TFs
Other Linum usitatissimum TFs

574 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACHR008952 Anopheles christyi ACHR008952 I
AEPI008594 Anopheles epiroticus AEPI008594 I
e_gw.291.69.1 Branchiostoma floridae e_gw.291.69.1 I
CpipJ_CPIJ013490 Culex pipiens CpipJ_CPIJ013490 I
CPIJ013490 Culex quinquefasciatus CPIJ013490 I
tead1b Danio rerio ENSDARG00000059483 I
Tead3 Dipodomys ordii ENSDORG00000010798 I
TEAD3 Macaca mulatta ENSMMUG00000015909 I
TEAD3 Microcebus murinus ENSMICG00000000029 I
TEAD1 Microcebus murinus ENSMICG00000007178 I
TEAD3 Pan troglodytes ENSPTRG00000018086 I
PPAI001408 Phlebotomus papatasi PPAI001408 I
ENSSHAG00000015930 Sarcophilus harrisii ENSSHAG00000015930 I
SMTD_0001953201 Schistosoma mattheei SMTD_0001953201 I