CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Lus10036758.g *(Linum usitatissimum)* Myb/SANT
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00249 (Myb_DNA-binding)	IPR014778	Lus10036758.g	T288181_2.00	JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
MYR2 M02294_2.00	Arabidopsis thaliana	NKATDCBNN	NNVGHATMN	PBM Weirauch et al.(2014) pTH7097	0.685	0.787
MYR2 M07063_2.00	Arabidopsis thaliana	NNDAAKATTCYHHN	NDDRGAATMTTHNN	Dap-seq OMalley et al.(2016) At3g04030_col_a	0.685	0.787
MYR2 M07064_2.00	Arabidopsis thaliana	VRAAKATTCBHWNNN	NNNWDVGAATMTTYB	Dap-seq OMalley et al.(2016) At3g04030_colamp_a	0.685	0.787
MYR1 M02309_2.00	Arabidopsis thaliana	NKATNCBNNN	NNNVGNATMN	PBM Weirauch et al.(2014) pTH8859	0.679	0.766
PHL12 M01077_2.00	Arabidopsis thaliana	NWKATTCBNN	NNVGAATMWN	PBM Sullivan et al.(2014) pTH7098	0.664	0.745
PHL12 M07079_2.00	Arabidopsis thaliana	RGAATATTCYYTWN	NWARRGAATATTCY	Dap-seq OMalley et al.(2016) At3g12730_col_a	0.664	0.745
PHL12 M07080_2.00	Arabidopsis thaliana	NNRAAKATTCBHHN	NDDVGAATMTTYNN	Dap-seq OMalley et al.(2016) At3g12730_colamp_a	0.664	0.745
For this family, TFs with SR scores > 0.661* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Lus10036758	Myb	12	63	RLKWTADLHSLFIDAVNRLGGPEKATPKSLMRVMEIPGLTLYHLKSHLQKYR

Links
Other Myb/SANT family TFs
Other *Linum usitatissimum* TFs