Lus10040583.g (Linum usitatissimum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Lus10040583.g T288235_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PHL6
M02295_2.00 		Arabidopsis thaliana
NNWKATNCBN
NVGNATMWNN		 PBM
Weirauch et al.(2014)
pTH7071 		0.703 0.681
PHL6
M07083_2.00 		Arabidopsis thaliana
NDGAAAACH
DGTTTTCHN		 Dap-seq
OMalley et al.(2016)
At3g13040_col_b 		0.703 0.681
PHL1
M02310_2.00 		Arabidopsis thaliana
NWKATNCBNN
NNVGNATMWN		 PBM
Weirauch et al.(2014)
pTH7122 		0.689 0.702
PHL1
M07132_2.00 		Arabidopsis thaliana
MDRGAATATTCBNWN
NWNVGAATATTCYHK		 Dap-seq
OMalley et al.(2016)
At5g29000_col_a 		0.689 0.702
PHR1
M02302_2.00 		Arabidopsis thaliana
NWKATNCBNN
NNVGNATMWN		 PBM
Weirauch et al.(2014)
pTH7249 		0.677 0.723
PHL7
M02292_2.00 		Arabidopsis thaliana
NWGATDCBNN
NNVGHATCWN		 PBM
Weirauch et al.(2014)
pTH7253 		0.674 0.702
PK10342.1
M02351_2.00 		Cannabis sativa
WAGATKCS
SGMATCTW		 PBM
Weirauch et al.(2014)
pTH9489 		0.674 0.702
PHL7
M07040_2.00 		Arabidopsis thaliana
DRNAKATTCBNHNNN
NNNDNVGAATMTNYH		 Dap-seq
OMalley et al.(2016)
At2g01060_colamp_a 		0.674 0.702
PHL7
M07041_2.00 		Arabidopsis thaliana
VGAATATTCBNHH
DDNVGAATATTCB		 Dap-seq
OMalley et al.(2016)
At2g01060_col 		0.674 0.702
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10040583 Myb 175 226

Links

Other Myb/SANT family TFs
Other Linum usitatissimum TFs

263 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000018448 Ailuropoda melanoleuca ENSAMEG00000018448 I
MECP2 Anolis carolinensis ENSACAG00000012519 I
ENSAMXG00000017019 Astyanax mexicanus ENSAMXG00000017019 I
ENSP00000395535-D1 Bos grunniens ENSP00000395535-D1 I
MECP2 Bos taurus ENSBTAG00000047855 I
MECP2 Callithrix jacchus ENSCJAG00000016796 I
MECP2 Canis familiaris ENSCAFG00000019440 I
MECP2 Cavia porcellus ENSCPOG00000012579 I
Cmyd_10000498 Chelonia mydas Cmyd_10000498 I
ENSCSAG00000006798 Chlorocebus sabaeus ENSCSAG00000006798 I
mecp2 Danio rerio ENSDARG00000014218 I
MECP2 Dasypus novemcinctus ENSDNOG00000013419 I
Mecp2 Dipodomys ordii ENSDORG00000014978 I
MECP2 Equus caballus ENSECAG00000018208 I
MECP2 Felis catus ENSFCAG00000011389 I
mecp2 Gasterosteus aculeatus ENSGACG00000000798 I
MECP2 Gorilla gorilla ENSGGOG00000000222 I
MECP2 Homo sapiens ENSG00000169057 D
ENSSTOG00000006094 Ictidomys tridecemlineatus ENSSTOG00000006094 I
ENSLACG00000011281 Latimeria chalumnae ENSLACG00000011281 I
ENSLOCG00000014725 Lepisosteus oculatus ENSLOCG00000014725 I
MECP2 Loxodonta africana ENSLAFG00000016292 I
ENSP00000395535 Macaca fascicularis ENSP00000395535 I
MECP2 Macaca mulatta ENSMMUG00000018704 I
ENSMEUG00000002761 Macropus eugenii ENSMEUG00000002761 I
MECP2 Microcebus murinus ENSMICG00000005149 I
MECP2 Monodelphis domestica ENSMODG00000011643 I
ENSMPUG00000009072 Mustela putorius furo ENSMPUG00000009072 I
Mecp2 Mus musculus ENSMUSG00000031393 D
Myotis_brandtii_IRAK1_10010673 Myotis brandtii Myotis_brandtii_IRAK1_10010673 I
MECP2 Myotis lucifugus ENSMLUG00000014297 I
ENSNLEG00000013783 Nomascus leucogenys ENSNLEG00000013783 I
Ogr09995 Ophisaurus gracilis Ogr09995 I
ENSONIG00000000809 Oreochromis niloticus ENSONIG00000000809 I
MECP2 Ornithorhynchus anatinus ENSOANG00000011024 I
MECP2 Oryctolagus cuniculus ENSOCUG00000013147 I
mecp2 Oryzias latipes ENSORLG00000020117 I
MECP2 Otolemur garnettii ENSOGAG00000015115 I
ENSOARG00000005806 Ovis aries ENSOARG00000005806 I
MECP2 Pan troglodytes ENSPTRG00000022424 I
ENSPANG00000011691 Papio anubis ENSPANG00000011691 I
ENSPSIG00000002254 Pelodiscus sinensis ENSPSIG00000002254 I
ENSPFOG00000002307 Poecilia formosa ENSPFOG00000002307 I
Pvit_16673 Pogona vitticeps Pvit_16673 I
ENSPPYG00000020866 Pongo abelii ENSPPYG00000020866 I
MECP2 Procavia capensis ENSPCAG00000011826 I
Mecp2 Rattus norvegicus ENSRNOG00000056659 I
ENSSHAG00000007851 Sarcophilus harrisii ENSSHAG00000007851 I
MECP2 Sorex araneus ENSSARG00000012925 I
ENSSSCG00000012796 Sus scrofa ENSSSCG00000012796 I
mecp2 Takifugu rubripes ENSTRUG00000006419 I
mecp2 Tetraodon nigroviridis ENSTNIG00000005114 I
MECP2 Tursiops truncatus ENSTTRG00000004653 I
mecp2.S Xenopus laevis XB-GENE-494744 I
mecp2 Xenopus tropicalis XB-GENE-494740 I