MDP0000480596 (Malus domestica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 MDP0000480596 T288630_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB73
M07114_2.00 		Arabidopsis thaliana
TAACBGWHWHW
WDWDWCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB73_col_a 		0.721 0.796
PK28565.1
M02357_2.00 		Cannabis sativa
TAACBGTY
RACVGTTA		 PBM
Weirauch et al.(2014)
pTH9653 		0.700 0.774
AtMYB70
M01071_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH8588 		0.700 0.763
AtMYB70
M07048_2.00 		Arabidopsis thaliana
YAACBGWHWWAAMN
NKTTWWDWCVGTTR		 Dap-seq
OMalley et al.(2016)
MYB70_col_a 		0.700 0.763
MYB44
M01082_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH7078 		0.682 0.785
MYB44
M07155_2.00 		Arabidopsis thaliana
HDTAACBGWHW
WDWCVGTTAHD		 Dap-seq
OMalley et al.(2016)
MYB44_colamp_a 		0.682 0.785
MYB44
M07156_2.00 		Arabidopsis thaliana
HAACBRWHWWAACBGHHWH
DWDDCVGTTWWDWYVGTTD		 Dap-seq
OMalley et al.(2016)
MYB44_col 		0.682 0.785
OS02G0187700
M02327_2.00 		Oryza sativa
NTAMCKGTHN
NDACMGKTAN		 PBM
Weirauch et al.(2014)
pTH8645 		0.679 0.753
MYB1
M07068_2.00 		Arabidopsis thaliana
HDNNDNHWHWAACSGYHWH
DWDRCSGTTWDWDNHNNHD		 Dap-seq
OMalley et al.(2016)
MYB1_col_a 		0.671 0.710
F3A4.140
M02299_2.00 		Arabidopsis thaliana
YAACBGYY
RRCVGTTR		 PBM
Weirauch et al.(2014)
pTH7112 		0.667 0.796
F3A4.140
M07095_2.00 		Arabidopsis thaliana
TAACBGYHWHNNHNN
NNDNNDWDRCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB77_col_a 		0.667 0.796
F3A4.140
M07096_2.00 		Arabidopsis thaliana
AACCGYAACCSTAWHWWAMV
BKTWWDWTASGGTTRCGGTT		 Dap-seq
OMalley et al.(2016)
MYB77_colamp_a 		0.667 0.796
F3A4.140
M02701_2.00 		Arabidopsis thaliana
SYAACYGYCVHBN
NVDBGRCRGTTRS		 SELEX
Mathelier et al.(2014)
MA0575.1 		0.667 0.796
F3A4.140
M11044_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB77_01 		0.667 0.796
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000480596 Myb 34 80
MDP0000480596 Myb 86 131

Links

Other Myb/SANT family TFs
Other Malus domestica TFs

210 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10011185.g Linum usitatissimum Lus10011185.g I
MSY001_0153 Malassezia sympodialis MSY001_0153 N
MELLADRAFT_67186 Melampsora laricipopulina MELLADRAFT_67186 N
MVLG_02806 Microbotryum violaceum MVLG_02806 N
PAN0_004d2310 Pseudozyma antarctica PAN0_004d2310 I
PaG_04708 Pseudozyma aphidis PaG_04708 I
PSEUBRA_SCAF4g04935 Pseudozyma brasiliensis PSEUBRA_SCAF4g04935 I
PFL1_06342 Pseudozyma flocculosa PFL1_06342 I
PHSY_006379 Pseudozyma hubeiensis PHSY_006379 I
PGTG_03031 Puccinia graminis PGTG_03031 N
PTTG_06043 Puccinia triticina PTTG_06043 N
V565_005010 Rhizoctonia solani V565_005010 N
RHTO_04760 Rhodosporidium toruloides RHTO_04760 N
sr13476 Sporisorium reilianum sr13476 I
K437DRAFT_223158 Tilletiaria anomala K437DRAFT_223158 N
UHOR_03747 Ustilago hordei UHOR_03747 I
UM02280 Ustilago maydis UM02280 I