MDP0000915330 (Malus domestica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 MDP0000915330 T288748_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q2TCH0_PETHY
M11072_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PH4_01 		0.774 0.839
MYB4
M02303_2.00 		Arabidopsis thaliana
YACCWACY
RGTWGGTR		 PBM
Weirauch et al.(2014)
pTH7075 		0.717 0.796
MYB4
M07115_2.00 		Arabidopsis thaliana
NYYACCWAMHWHNDD
HHNDWDKTWGGTRRN		 Dap-seq
OMalley et al.(2016)
MYB4_col200_a 		0.717 0.796
MYB3
M02288_2.00 		Arabidopsis thaliana
NNYACCTACCN
NGGTAGGTRNN		 PBM
Weirauch et al.(2014)
pTH7125 		0.713 0.785
WER
M11047_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WEREWOLF_Q2_01 		0.695 0.720
WER
M11048_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WEREWOLF_Q2 		0.695 0.720
MYB62
M07027_2.00 		Arabidopsis thaliana
NHRCCTAAYTWNHNN
NNDNWARTTAGGYDN		 Dap-seq
OMalley et al.(2016)
MYB62_col_a 		0.695 0.688
MYB62
M07028_2.00 		Arabidopsis thaliana
HNKRCCTAACTHH
DDAGTTAGGYMND		 Dap-seq
OMalley et al.(2016)
MYB62_colamp_a 		0.695 0.688
MYB111
M00882_2.00 		Arabidopsis thaliana
NNNAMCDAMY
RKTHGKTNNN		 PBM
Franco-Zorrilla et al.(2014)
MYB111 		0.674 0.796
GRMZM2G005066
M11056_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$C1_Q2 		0.667 0.710
MYB23
M07133_2.00 		Arabidopsis thaliana
HCAACWAHHHH
DDDDTWGTTGD		 Dap-seq
OMalley et al.(2016)
MYB23_col_a 		0.665 0.710
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000915330 Myb 14 61
MDP0000915330 Myb 67 112

Links

Other Myb/SANT family TFs
Other Malus domestica TFs

837 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ATMYBL2 Arabidopsis lyrata fgenesh2_kg.2__1365__AT1G71030.1 N
ATMYBL2 Arabidopsis thaliana AT1G71030 N
Bostr.10273s0244 Boechera stricta Bostr.10273s0244 N
Bo2g070770 Brassica oleracea Bo2g070770 N
Bo6g112670 Brassica oleracea Bo6g112670 N
Bra007957 Brassica rapa Bra007957 N
Bra016164 Brassica rapa Bra016164 N
Cagra.0147s0041 Capsella grandiflora Cagra.0147s0041 N
Carubv10020983m.g Capsella rubella Carubv10020983m.g N
Ca_11427 Cicer arietinum Ca_11427 N
Thhalv10019036m.g Eutrema salsugineum Thhalv10019036m.g N
mgf018170m Mimulus guttatus mgf018170m N
OBART01G27550 Oryza barthii OBART01G27550 N
OGLUM01G01950 Oryza glumaepatula OGLUM01G01950 N
OMERI01G01270 Oryza meridionalis OMERI01G01270 N
30072.m000986 Ricinus communis 30072.m000986 N