orange1.1g022072m.g (Citrus sinensis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 orange1.1g022072m.g T288838_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G24120
M00729_2.00 		Arabidopsis thaliana
NNKATDCBNN
NNVGHATMNN		 PBM
Chang et al.(2013)
pTH7086 		0.769 0.851
UNE16
M01270_2.00 		Arabidopsis thaliana
NWKATTCBNN
NNVGAATMWN		 PBM
Lambert et al.(2019)
pTH9967 		0.769 0.851
AT3G24120
M07085_2.00 		Arabidopsis thaliana
HAKATTCB
VGAATMTD		 Dap-seq
OMalley et al.(2016)
At3g24120_col_a 		0.769 0.851
AT3G24120
M07086_2.00 		Arabidopsis thaliana
NDRAAKATTCBHHN
NDDVGAATMTTYHN		 Dap-seq
OMalley et al.(2016)
At3g24120_colamp_a 		0.769 0.851
PHL11
M07134_2.00 		Arabidopsis thaliana
NNRAAKATTCYHHN
NDDRGAATMTTYNN		 Dap-seq
OMalley et al.(2016)
AT5G45580_col_a 		0.717 0.787
PHL11
M07135_2.00 		Arabidopsis thaliana
NRAAKATTCYHHNN
NNDDRGAATMTTYN		 Dap-seq
OMalley et al.(2016)
AT5G45580_colamp_a 		0.717 0.787
MYR1
M02309_2.00 		Arabidopsis thaliana
NKATNCBNNN
NNNVGNATMN		 PBM
Weirauch et al.(2014)
pTH8859 		0.704 0.766
MYR2
M02294_2.00 		Arabidopsis thaliana
NKATDCBNN
NNVGHATMN		 PBM
Weirauch et al.(2014)
pTH7097 		0.698 0.745
MYR2
M07063_2.00 		Arabidopsis thaliana
NNDAAKATTCYHHN
NDDRGAATMTTHNN		 Dap-seq
OMalley et al.(2016)
At3g04030_col_a 		0.698 0.745
MYR2
M07064_2.00 		Arabidopsis thaliana
VRAAKATTCBHWNNN
NNNWDVGAATMTTYB		 Dap-seq
OMalley et al.(2016)
At3g04030_colamp_a 		0.698 0.745
PHL12
M01077_2.00 		Arabidopsis thaliana
NWKATTCBNN
NNVGAATMWN		 PBM
Sullivan et al.(2014)
pTH7098 		0.691 0.809
PHL12
M07079_2.00 		Arabidopsis thaliana
RGAATATTCYYTWN
NWARRGAATATTCY		 Dap-seq
OMalley et al.(2016)
At3g12730_col_a 		0.691 0.809
PHL12
M07080_2.00 		Arabidopsis thaliana
NNRAAKATTCBHHN
NDDVGAATMTTYNN		 Dap-seq
OMalley et al.(2016)
At3g12730_colamp_a 		0.691 0.809
PHL7
M02292_2.00 		Arabidopsis thaliana
NWGATDCBNN
NNVGHATCWN		 PBM
Weirauch et al.(2014)
pTH7253 		0.681 0.745
PK10342.1
M02351_2.00 		Cannabis sativa
WAGATKCS
SGMATCTW		 PBM
Weirauch et al.(2014)
pTH9489 		0.681 0.745
PHL7
M07040_2.00 		Arabidopsis thaliana
DRNAKATTCBNHNNN
NNNDNVGAATMTNYH		 Dap-seq
OMalley et al.(2016)
At2g01060_colamp_a 		0.681 0.745
PHL7
M07041_2.00 		Arabidopsis thaliana
VGAATATTCBNHH
DDNVGAATATTCB		 Dap-seq
OMalley et al.(2016)
At2g01060_col 		0.681 0.745
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g022072m Myb 36 87
orange1.1g022117m Myb 36 87
orange1.1g022954m Myb 36 87

Links

Other Myb/SANT family TFs
Other Citrus sinensis TFs

626 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ARB_01992 Arthroderma benhamiae ARB_01992 I
MCYG_00576 Arthroderma otae MCYG_00576 I
BDDG_07136 Blastomyces dermatitidis BDDG_07136 I
Bcin09g01580 Botrytis cinerea Bcin09g01580 N
A1O1_08709 Capronia coronata A1O1_08709 I
A1O3_08094 Capronia epimyces A1O3_08094 I
PV04_03585 Capronia semiimmersa PV04_03585 N
Z519_02267 Cladophialophora bantiana Z519_02267 I
G647_04998 Cladophialophora carrionii G647_04998 I
PV07_06716 Cladophialophora immunda PV07_06716 I
A1O5_04435 Cladophialophora psammophila A1O5_04435 I
A1O7_03387 Cladophialophora yegresii A1O7_03387 I
HMPREF1541_04403 Cyphellophora europaea HMPREF1541_04403 I
H072_5617 Dactylellina haptotyla H072_5617 I
EPUS_04902 Endocarpon pusillum EPUS_04902 I
EV44_g6223 Erysiphe necator EV44_g6223 I
A1O9_12959 Exophiala aquamarina A1O9_12959 I
A1O9_03458 Exophiala aquamarina A1O9_03458 I
HMPREF1120_04468 Exophiala dermatitidis HMPREF1120_04468 I
PV10_05482 Exophiala mesophila PV10_05482 I
PV06_02748 Exophiala oligosperma PV06_02748 I
PV11_00872 Exophiala sideris PV11_00872 I
PV08_11124 Exophiala spinifera PV08_11124 I
PV05_05708 Exophiala xenobiotica PV05_05708 I
Z517_10389 Fonsecaea pedrosoi Z517_10389 I
HCBG_05620 Histoplasma capsulatum HCBG_05620 D
MCYG_00576 Microsporum canis MCYG_00576 I
MGYG_01386 Microsporum gypseum MGYG_01386 I
PABG_06482 Paracoccidioides brasiliensis PABG_06482 I
PMAA_018530 Penicillium marneffei PMAA_018530 I
PDE_03379 Penicillium oxalicum PDE_03379 I
GMDG_06896 Pseudogymnoascus destructans GMDG_06896 I
V499_05047 Pseudogymnoascus pannorum V499_05047 I
Z518_01320 Rhinocladiella mackenziei Z518_01320 I
S40288_07681 Stachybotrys chartarum S40288_07681 N
PMAA_018530 Talaromyces marneffei PMAA_018530 I
TSTA_026540 Talaromyces stipitatus TSTA_026540 I
VHEMI07137 Torrubiella hemipterigena VHEMI07137 I
TEQG_05447 Trichophyton equinum TEQG_05447 I
H101_06341 Trichophyton interdigitale H101_06341 I
H102_07503 Trichophyton rubrum H102_07503 I
H105_07531 Trichophyton soudanense H105_07531 I
TESG_05799 Trichophyton tonsurans TESG_05799 I