CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Pavir.Fa00479
(
Panicum virgatum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Pavir.Fa00479
T289176_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Fa00479.1.p
Myb
18
65
KGPWKAEEDEVLRRHVREHGPREWSSIRSKGLLPRTGKSCRLRWVNKL
Pavir.Fa00479.1.p
Myb
72
116
GCKFSAEEERVVIDLQAQIGNKWARIATYLPGRTDNDVKNFWSTR
Links
Other
Myb/SANT
family TFs
Other
Panicum virgatum
TFs
86 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSP00000327538-D85
Bos grunniens
ENSP00000327538-D85
I
ZNF283
Bos taurus
ENSBTAG00000012522
I
ZNF283
Canis familiaris
ENSCAFG00000032633
I
ENSCSAG00000003353
Chlorocebus sabaeus
ENSCSAG00000003353
I
ZNF283
Homo sapiens
ENSG00000167637
D
ENSMMUP00000001733
Macaca fascicularis
ENSMMUP00000001733
I
ZNF283
Macaca mulatta
ENSMMUG00000028753
I
ENSNLEG00000001799
Nomascus leucogenys
ENSNLEG00000001799
I
ZNF283
Otolemur garnettii
ENSOGAG00000032330
I
ENSPANG00000008804
Papio anubis
ENSPANG00000008804
I
ENSPPYG00000010077
Pongo abelii
ENSPPYG00000010077
I
ZNF283
Tursiops truncatus
ENSTTRG00000003652
I