CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Ib04149
(
Panicum virgatum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Pavir.Ib04149
T289295_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ib04149.1.p
Myb
8
58
LRWSDDLHMIFVKAVAYQGEAKPTALKKMMETMGVRGLTIQNIKSHLQRYR
Links
Other
Myb/SANT
family TFs
Other
Panicum virgatum
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Ia01117
Panicum virgatum
Pavir.Ia01117
N
0.852
Si040114m.g
Setaria italica
Si040114m.g
N
0.723
Sb01g013080
Sorghum bicolor
Sb01g013080
N
0.683
Traes_4AL_1C649DD2E
Triticum aestivum
Traes_4AL_1C649DD2E
N
0.686
Traes_4BS_C0031D503
Triticum aestivum
Traes_4BS_C0031D503
N
0.679