Pavir.J28088 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.J28088 T289437_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J28088.1.p Myb 35 90

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI5G17280 Brachypodium distachyon BRADI5G17280 N 0.809
OB04G27370 Oryza brachyantha OB04G27370 N 0.817
ORGLA04G0174800 Oryza glaberrima ORGLA04G0174800 N 0.842
OGLUM04G20360 Oryza glumaepatula OGLUM04G20360 N 0.842
BGIOSGA016861 Oryza indica BGIOSGA016861 N 0.842
ONIVA04G18650 Oryza nivara ONIVA04G18650 N 0.842
OPUNC04G18070 Oryza punctata OPUNC04G18070 N 0.842
ORUFI04G22010 Oryza rufipogon ORUFI04G22010 N 0.842
Pavir.Ga00658 Panicum virgatum Pavir.Ga00658 N 0.901
Sb06g024110 Sorghum bicolor Sb06g024110 N 0.867
GRMZM2G427087 Zea mays GRMZM2G427087 N 0.867