Thhalv10020213m.g (Eutrema salsugineum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Thhalv10020213m.g T290104_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARR1
M02296_2.00 		Arabidopsis thaliana
NDGATHYBNN
NNVRDATCHN		 PBM
Weirauch et al.(2014)
pTH8257 		0.856 0.936
ARR1
M02297_2.00 		Arabidopsis thaliana
NAAGATHCKN
NMGDATCTTN		 PBM
Weirauch et al.(2014)
pTH8590 		0.823 0.894
e_gw1.362.4.1
M02341_2.00 		Physcomitrella patens
NNNRDATCNN
NNGATHYNNN		 PBM
Weirauch et al.(2014)
pTH8461 		0.712 0.830
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10020213m Myb 238 288

Links

Other Myb/SANT family TFs
Other Eutrema salsugineum TFs

220 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OBART04G08380 Oryza barthii OBART04G08380 N
OB04G16510 Oryza brachyantha OB04G16510 N
RR29 Oryza indica BGIOSGA016167 N
OLONG_016727 Oryza longistaminata OLONG_016727 N
OMERI04G07740 Oryza meridionalis OMERI04G07740 N
ONIVA04G06810 Oryza nivara ONIVA04G06810 N
OPUNC04G07000 Oryza punctata OPUNC04G07000 N
ORUFI04G09620 Oryza rufipogon ORUFI04G09620 N