CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Thhalv10025926m.g *(Eutrema salsugineum)* Myb/SANT
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00249 (Myb_DNA-binding)	IPR014778	Thhalv10025926m.g	T290149_2.00	JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
MYB4 M02303_2.00	Arabidopsis thaliana	YACCWACY	RGTWGGTR	PBM Weirauch et al.(2014) pTH7075	0.789	0.871
MYB4 M07115_2.00	Arabidopsis thaliana	NYYACCWAMHWHNDD	HHNDWDKTWGGTRRN	Dap-seq OMalley et al.(2016) MYB4_col200_a	0.789	0.871
MYB3 M02288_2.00	Arabidopsis thaliana	NNYACCTACCN	NGGTAGGTRNN	PBM Weirauch et al.(2014) pTH7125	0.776	0.849
MYB51 M07010_2.00	Arabidopsis thaliana	NHNHHNHNNNYYYACCWACYW	WRGTWGGTRRRNNNDNDDNDN	Dap-seq OMalley et al.(2016) MYB51_col_a	0.672	0.742
Q2TCH0_PETHY M11072_2.00	Petunia x hybrida	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$PH4_01	0.665	0.710
PK06182.1 M02349_2.00	Cannabis sativa	WTACCTACCN	NGGTAGGTAW	PBM Weirauch et al.(2014) pTH9581	0.664	0.742
For this family, TFs with SR scores > 0.661* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Thhalv10025926m	Myb	14	61	KGAWTKEEDDKLISYIKSHGEGCWRSLPRSAGLLRCGKSCRLRWINYL
Thhalv10025926m	Myb	67	112	RGNFTLDEDDLIIKLHSLLGNKWSLIATRLPGRTDNEIKNYWNTHV

Links
Other Myb/SANT family TFs
Other *Eutrema salsugineum* TFs