PK13930.1 (Cannabis sativa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 PK13930.1 T290403_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB46
M00877_2.00 		Arabidopsis thaliana
NAMCNDHHN
NDDHNGKTN		 PBM
Franco-Zorrilla et al.(2014)
MYB46 		0.795 0.903
MYB46
M11046_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB46_Q6 		0.795 0.903
MYB83
M01073_2.00 		Arabidopsis thaliana
YACCHACC
GGTDGGTR		 PBM
Sullivan et al.(2014)
pTH7140 		0.789 0.860
MYB83
M07066_2.00 		Arabidopsis thaliana
YCACCAACHNH
DNDGTTGGTGR		 Dap-seq
OMalley et al.(2016)
MYB83_col_a 		0.789 0.860
MYB83
M07067_2.00 		Arabidopsis thaliana
NCACCWAMCDNHNNN
NNNDNHGKTWGGTGN		 Dap-seq
OMalley et al.(2016)
MYB83_colamp_a 		0.789 0.860
MYB61
M07002_2.00 		Arabidopsis thaliana
HNYAMCHACCDNHNH
DNDNHGGTDGKTRND		 Dap-seq
OMalley et al.(2016)
MYB61_col_a 		0.740 0.763
MYB61
M07003_2.00 		Arabidopsis thaliana
NHNYACCWAMCDH
DHGKTWGGTRNDN		 Dap-seq
OMalley et al.(2016)
MYB61_colamp_a 		0.740 0.763
MYB55
M00876_2.00 		Arabidopsis thaliana
ACCWAMCD
HGKTWGGT		 PBM
Franco-Zorrilla et al.(2014)
MYB55 		0.713 0.763
MYB55
M07102_2.00 		Arabidopsis thaliana
HNNNHBYAMCWAMCD
HGKTWGKTRVDNNND		 Dap-seq
OMalley et al.(2016)
MYB55_colamp_a 		0.713 0.763
MYB55
M07103_2.00 		Arabidopsis thaliana
NYNYAMCHACCRHH
DDYGGTDGKTRNRN		 Dap-seq
OMalley et al.(2016)
MYB55_col 		0.713 0.763
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PK13930.1 Myb 14 61
PK13930.1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Cannabis sativa TFs

569 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000001062 Ailuropoda melanoleuca ENSAMEG00000001062 I
Alligator_sinensis_CCG003524.1 Alligator sinensis Alligator_sinensis_CCG003524.1 I
ENSAPLG00000009825 Anas platyrhynchos ENSAPLG00000009825 I
MYCN Anolis carolinensis ENSACAG00000011351 I
Afo_R015728 Aptenodytes forsteri Afo_R015728 I
ENSP00000281043-D1 Bos grunniens ENSP00000281043-D1 I
ENSBTAG00000023372 Bos taurus ENSBTAG00000023372 I
Brh_R011889 Buceros rhinoceros Brh_R011889 I
Aan_R015370 Calypte anna Aan_R015370 I
ENSCAFG00000003715 Canis familiaris ENSCAFG00000003715 I
MYCN Cavia porcellus ENSCPOG00000020263 I
Cmyd_10010643 Chelonia mydas Cmyd_10010643 I
ENSCSAG00000007889 Chlorocebus sabaeus ENSCSAG00000007889 I
MYCN Dasypus novemcinctus ENSDNOG00000047342 I
ENSETEG00000007657 Echinops telfairi ENSETEG00000007657 I
ENSECAG00000002896 Equus caballus ENSECAG00000002896 I
ENSFCAG00000022893 Felis catus ENSFCAG00000022893 I
ENSFALG00000008694 Ficedula albicollis ENSFALG00000008694 I
MYCN Gallus gallus ENSGALG00000016462 I
Gfo_R015246 Geospiza fortis Gfo_R015246 I
MYCN Gorilla gorilla ENSGGOG00000005130 I
MYCN Homo sapiens ENSG00000134323 D
ENSSTOG00000021587 Ictidomys tridecemlineatus ENSSTOG00000021587 I
ENSSTOG00000012252 Ictidomys tridecemlineatus ENSSTOG00000012252 I
MYCN Loxodonta africana ENSLAFG00000015181 I
ENSMMUP00000024750 Macaca fascicularis ENSMMUP00000024750 I
ENSMMUG00000018805 Macaca mulatta ENSMMUG00000018805 I
ENSMEUG00000006154 Macropus eugenii ENSMEUG00000006154 I
ENSMGAG00000015965 Meleagris gallopavo ENSMGAG00000015965 I
MYCN Microcebus murinus ENSMICG00000013903 I
ENSMPUG00000013620 Mustela putorius furo ENSMPUG00000013620 I
Mycn Mus musculus ENSMUSG00000037169 D
Myotis_brandtii_MYCN_10020172 Myotis brandtii Myotis_brandtii_MYCN_10020172 I
ENSMLUG00000026821 Myotis lucifugus ENSMLUG00000026821 I
ENSNLEG00000014496 Nomascus leucogenys ENSNLEG00000014496 I
MYCN Ochotona princeps ENSOPRG00000004369 I
Ogr12112 Ophisaurus gracilis Ogr12112 I
MYCN Ornithorhynchus anatinus ENSOANG00000012832 I
ENSOCUG00000026053 Oryctolagus cuniculus ENSOCUG00000026053 I
MYCN Otolemur garnettii ENSOGAG00000010927 I
ENSOARG00000016462 Ovis aries ENSOARG00000016462 I
MYCN Pan troglodytes ENSPTRG00000011672 I
ENSPANG00000019058 Papio anubis ENSPANG00000019058 I
ENSPSIG00000012289 Pelodiscus sinensis ENSPSIG00000012289 I
Pvit_07093 Pogona vitticeps Pvit_07093 I
ENSPPYG00000012635 Pongo abelii ENSPPYG00000012635 I
MYCN Pteropus vampyrus ENSPVAG00000010355 I
Mycn Rattus norvegicus ENSRNOG00000051372 I
MYCN Sus scrofa ENSSSCG00000008618 I
Tal_R000146 Tyto alba Tal_R000146 I
ENSVPAG00000007723 Vicugna pacos ENSVPAG00000007723 I