CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PPAI005590
(
Phlebotomus papatasi
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
PPAI005590
T291402_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Myb
M03918_2.00
Drosophila melanogaster
NRAWAACCGTTAVR
YBTAACGGTTWTYN
SELEX
Nitta et al.(2015)
Myb_1
0.696
0.727
Myb
M03919_2.00
Drosophila melanogaster
YNTAACGGTHDNHH
DDNHDACCGTTANR
SELEX
Nitta et al.(2015)
Myb_2
0.696
0.727
Myb
M03920_2.00
Drosophila melanogaster
NDAWWACCGTTACD
HGTAACGGTWWTHN
SELEX
Nitta et al.(2015)
Myb_3
0.696
0.727
Myb
M03921_2.00
Drosophila melanogaster
DDDTDACCGTTACD
HGTAACGGTHAHHH
SELEX
Nitta et al.(2015)
Myb_4
0.696
0.727
Myb
M08215_2.00
Drosophila melanogaster
MARYTGCAK
MTGCARYTK
ChIP-seq
Contrino et al.(2012)
Mf27
0.696
0.727
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PPAI005590-PA
Myb
51
96
RTRWTKYEDIALKNLVDTYGENWSIVAKQMKDRTDVQCQQRWTKVV
PPAI005590-PA
Myb
102
148
KGPWTKEEDDKVVELVSRYGPKKWTLIARHLKGRIGKQCRERWHNHL
PPAI005590-PA
Myb
154
199
KTAWTDEEDNIIYQAHQQWGNQWAKIAKLLPGRTDNAIKNHWNSTM
Links
Other
Myb/SANT
family TFs
Other
Phlebotomus papatasi
TFs
52 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bm11274
Brugia malayi
Bm11274
N
0.000
Bm2582
Brugia malayi
Bm2582
N
0.000
BTMF_0001630801
Brugia timori
BTMF_0001630801
N
0.000
nDi.2.2.2.g11481
Dirofilaria immitis
nDi.2.2.2.g11481
N
0.000
EEL_0000830101
Elaeophora elaphi
EEL_0000830101
N
0.000
nLs.2.1.2.g07235
Litomosoides sigmodontis
nLs.2.1.2.g07235
N
0.000
LOAG_14115
Loa loa
LOAG_14115
N
0.000
OFLC_0001102001
Onchocerca flexuosa
OFLC_0001102001
N
0.000
nOo.2.0.1.g08536
Onchocerca ochengi
nOo.2.0.1.g08536
N
0.000
WBGene00244893
Onchocerca volvulus
WBGene00244893
N
0.000
WUBG_13863
Wuchereria bancrofti
WUBG_13863
N
0.000