CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

ANAC052 *(Arabidopsis thaliana)* NAC/NAM
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF02365 (NAM)	IPR003441	AT3G10490	T292064_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
ANAC050 M07200_2.00	Arabidopsis thaliana	CTTGHNNYNCAAGNA	TNCTTGNRNNDCAAG	Dap-seq OMalley et al.(2016) ANAC050_colamp_a	0.958	0.965
ANAC050 M07201_2.00	Arabidopsis thaliana	CTTGNNNHRCAMGBHA	TDVCKTGYDNNNCAAG	Dap-seq OMalley et al.(2016) ANAC050_col_v3a	0.958	0.965
For this family, TFs with SR scores > 0.870* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
AT3G10490.1	NAC/NAM	28	154	APGFRFHPTDEELVSYYLKRKVLGQPVRFDAIGEVDIYKHEPWDLAVFSRLKTRDQEWYFYSALDKKYGNGARMNRATNRGYWKATGKDREIRRDILLLGMKKTLVFHSGRAPDGLRTNWVMHEYRL
AT3G10490.2	NAC/NAM	28	154	APGFRFHPTDEELVSYYLKRKVLGQPVRFDAIGEVDIYKHEPWDLAVFSRLKTRDQEWYFYSALDKKYGNGARMNRATNRGYWKATGKDREIRRDILLLGMKKTLVFHSGRAPDGLRTNWVMHEYRL
AT3G10490.3	NAC/NAM	1	54	MNRATNRGYWKATGKDREIRRDILLLGMKKTLVFHSGRAPDGLRTNWVMHEYRL
AT3G10490.4	NAC/NAM	1	54	MNRATNRGYWKATGKDREIRRDILLLGMKKTLVFHSGRAPDGLRTNWVMHEYRL

Links
Other NAC/NAM family TFs
Other *Arabidopsis thaliana* TFs