CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ANAC102
(
Arabidopsis thaliana
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
AT5G63790
T292119_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC48
M11084_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$NAC6_01
0.943
0.807
NAC002
M00970_2.00
Arabidopsis thaliana
NBACGYAWMN
NKWTRCGTVN
PBM
Lindemose et al.(2014)
ATAF1
0.931
0.789
NAC002
M07159_2.00
Arabidopsis thaliana
KVCGTRWNNNWHWHKNHHWYND
HNRWDDNMDWDWNNNWYACGBM
Dap-seq
OMalley et al.(2016)
ATAF1_col_a
0.931
0.789
NAC002
M07160_2.00
Arabidopsis thaliana
YACGY
RCGTR
Dap-seq
OMalley et al.(2016)
ATAF1_colamp_a
0.931
0.789
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT5G63790.1
NAC/NAM
51
174
PAGFRFHPTDEELVKFYLCRRCASEPINVPVIAEIDLYKFNPWELPEMALYGEKEWYFFSHRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPKTLGIKKALVFYAGKAPKGIKTNWIMHEYRL
AT5G63790.2
NAC/NAM
61
184
PAGFRFHPTDEELVKFYLCRRCASEPINVPVIAEIDLYKFNPWELPEMALYGEKEWYFFSHRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPKTLGIKKALVFYAGKAPKGIKTNWIMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Arabidopsis thaliana
TFs
345 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00015p00229650
Amborella trichopoda
AMTR_s00015p00229650
I
AMTR_s00015p00228580
Amborella trichopoda
AMTR_s00015p00228580
I
PK21971.1
Cannabis sativa
PK21971.1
I
evm.TU.supercontig_3.53
Carica papaya
evm.TU.supercontig_3.53
I
Eucgr.K00331
Eucalyptus grandis
Eucgr.K00331
I
gene19219-v1.0-hybrid
Fragaria vesca
gene19219-v1.0-hybrid
I
gene13108-v1.0-hybrid
Fragaria vesca
gene13108-v1.0-hybrid
I
GLYMA04G41701
Glycine max
GLYMA04G41701
I
GLYMA06G13090
Glycine max
GLYMA06G13090
I
Gorai.008G270600
Gossypium raimondii
Gorai.008G270600
I
LjSGA_021425.1
Lotus japonicus
LjSGA_021425.1
I
MDP0000219647
Malus domestica
MDP0000219647
N
MDP0000767097
Malus domestica
MDP0000767097
I
mgf020540m
Mimulus guttatus
mgf020540m
I
OBART08G13340
Oryza barthii
OBART08G13340
I
Pm019783
Prunus mume
Pm019783
I
PRUPE_ppa007986mg
Prunus persica
PRUPE_ppa007986mg
I
TCM_015346
Theobroma cacao
TCM_015346
I
Traes_3DL_678D51EAD
Triticum aestivum
Traes_3DL_678D51EAD
N
TRIUR3_12546
Triticum urartu
TRIUR3_12546
I
VIT_16s0050g02510
Vitis vinifera
VIT_16s0050g02510
I