Bo5g085430 (Brassica oleracea)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bo5g085430 T292408_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC017
M07174_2.00 		Arabidopsis thaliana
NCKTGNBNNNCAMGNWA
TWNCKTGNNNVNCAMGN		 Dap-seq
OMalley et al.(2016)
ANAC017_colamp_v31 		0.916 0.867
NAC017
M07175_2.00 		Arabidopsis thaliana
NDNTTNCTTGBNNNNCAMG
CKTGNNNNVCAAGNAANHN		 Dap-seq
OMalley et al.(2016)
ANAC017_col 		0.916 0.867
NAC017
M11078_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT1G34190_Q2 		0.916 0.867
anac016
M07172_2.00 		Arabidopsis thaliana
DVCKTGNBNNNCAMG
CKTGNNNVNCAMGBH		 Dap-seq
OMalley et al.(2016)
ANAC016_col_a 		0.876 0.841
anac016
M07173_2.00 		Arabidopsis thaliana
TVCKTGNBNNNCAMG
CKTGNNNVNCAMGBA		 Dap-seq
OMalley et al.(2016)
ANAC016_colamp_a 		0.876 0.841
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo5g085430.1 NAC/NAM 17 143

Links

Other NAC/NAM family TFs
Other Brassica oleracea TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
csin107680 Clonorchis sinensis csin107680 N
ECANG7_04784 Echinococcus canadensis ECANG7_04784 N
EmuJ_000817400 Echinococcus multilocularis EmuJ_000817400 N
TTAC_0000325101 Hydatigera taeniaeformis TTAC_0000325101 N
HmN_000539500 Hymenolepis microstoma HmN_000539500 N
HNAJ_0001353001 Hymenolepis nana HNAJ_0001353001 N
T265_06110 Opisthorchis viverrini T265_06110 N
SSLN_0000929901 Schistocephalus solidus SSLN_0000929901 N
SCUD_0000966301 Schistosoma curassoni SCUD_0000966301 N
A_05964 Schistosoma haematobium A_05964 N
Sjc_0020540 Schistosoma japonicum Sjc_0020540 N
SMRZ_0001337301 Schistosoma margrebowiei SMRZ_0001337301 N
SMTD_0001485401 Schistosoma mattheei SMTD_0001485401 N
TsM_000750100 Taenia solium TsM_000750100 N
TRE_0001728601 Trichobilharzia regenti TRE_0001728601 N