Bra001365 (Brassica rapa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bra001365 T292509_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ANAC050
M07200_2.00 		Arabidopsis thaliana
CTTGHNNYNCAAGNA
TNCTTGNRNNDCAAG		 Dap-seq
OMalley et al.(2016)
ANAC050_colamp_a 		0.933 0.930
ANAC050
M07201_2.00 		Arabidopsis thaliana
CTTGNNNHRCAMGBHA
TDVCKTGYDNNNCAAG		 Dap-seq
OMalley et al.(2016)
ANAC050_col_v3a 		0.933 0.930
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra001365.1-P NAC/NAM 25 151

Links

Other NAC/NAM family TFs
Other Brassica rapa TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000020055 Ailuropoda melanoleuca ENSAMEG00000020055 I 0.000
ENSAMEG00000007961 Ailuropoda melanoleuca ENSAMEG00000007961 I 0.000
ENSP00000317170-D1 Bos grunniens ENSP00000317170-D1 I 0.000
ENSP00000389989-D1 Bos grunniens ENSP00000389989-D1 I 0.000
TIGD2 Bos taurus ENSBTAG00000015265 I 0.000
JRKL Bos taurus ENSBTAG00000037488 I 0.000
JRKL Canis familiaris ENSCAFG00000004081 I 0.000
TIGD2 Canis familiaris ENSCAFG00000009844 I 0.000
ENSCPOG00000013612 Cavia porcellus ENSCPOG00000013612 I 0.000
ENSCSAG00000000410 Chlorocebus sabaeus ENSCSAG00000000410 I 0.000
ENSCSAG00000000606 Chlorocebus sabaeus ENSCSAG00000000606 I 0.000
JRKL Erinaceus europaeus ENSEEUG00000014957 I 0.000
JRKL Felis catus ENSFCAG00000007462 I 0.000
JRKL Gorilla gorilla ENSGGOG00000000360 I 0.000
JRKL Homo sapiens ENSG00000183340 I 0.000
TIGD2 Homo sapiens ENSG00000180346 I 0.000
ENSSTOG00000028053 Ictidomys tridecemlineatus ENSSTOG00000028053 I 0.000
ENSSTOG00000026474 Ictidomys tridecemlineatus ENSSTOG00000026474 I 0.000
ENSLACG00000006290 Latimeria chalumnae ENSLACG00000006290 I 0.000
ENSLACG00000008134 Latimeria chalumnae ENSLACG00000008134 I 0.000
ENSLACG00000010942 Latimeria chalumnae ENSLACG00000010942 I 0.000
ENSLACG00000003439 Latimeria chalumnae ENSLACG00000003439 I 0.000
JRKL Loxodonta africana ENSLAFG00000032743 I 0.000
ENSP00000389989 Macaca fascicularis ENSP00000389989 I 0.000
ENSP00000317170 Macaca fascicularis ENSP00000317170 I 0.000
JRKL Macaca mulatta ENSMMUG00000003821 I 0.000
ENSMMUG00000006958 Macaca mulatta ENSMMUG00000006958 I 0.000
ENSMICG00000009416 Microcebus murinus ENSMICG00000009416 I 0.000
TIGD2 Monodelphis domestica ENSMODG00000019223 D 0.000
JRKL Monodelphis domestica ENSMODG00000024414 I 0.000
ENSMPUG00000019104 Mustela putorius furo ENSMPUG00000019104 I 0.000
ENSMPUG00000012306 Mustela putorius furo ENSMPUG00000012306 I 0.000
Tigd2 Mus musculus ENSMUSG00000049232 I 0.000
Jrkl Mus musculus ENSMUSG00000079083 I 0.000
JRKL Myotis lucifugus ENSMLUG00000025663 I 0.000
JRKL Ochotona princeps ENSOPRG00000010096 I 0.000
JRKL Ornithorhynchus anatinus ENSOANG00000014711 I 0.000
JRKL Oryctolagus cuniculus ENSOCUG00000024211 I 0.000
TIGD2 Otolemur garnettii ENSOGAG00000032052 I 0.000
ENSOGAG00000029206 Otolemur garnettii ENSOGAG00000029206 I 0.000
ENSOARG00000000411 Ovis aries ENSOARG00000000411 I 0.000
ENSOARG00000008312 Ovis aries ENSOARG00000008312 I 0.000
ENSPANG00000017875 Papio anubis ENSPANG00000017875 I 0.000
ENSPANG00000003755 Papio anubis ENSPANG00000003755 I 0.000
ENSPPYG00000003796 Pongo abelii ENSPPYG00000003796 I 0.000
ENSPPYG00000014930 Pongo abelii ENSPPYG00000014930 I 0.000
Tigd2 Rattus norvegicus ENSRNOG00000038449 I 0.000
Jrkl Rattus norvegicus ENSRNOG00000047133 I 0.000
ENSSHAG00000004352 Sarcophilus harrisii ENSSHAG00000004352 I 0.000
JRKL Vicugna pacos ENSVPAG00000008344 I 0.000