Bra005492 (Brassica rapa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bra005492 T292538_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC083
M02374_2.00 		Arabidopsis thaliana
WYACGYAANN
NNTTRCGTRW		 PBM
Weirauch et al.(2014)
pTH7308 		0.881 0.667
NAC083
M07230_2.00 		Arabidopsis thaliana
TRCKTRWNNNDYAMG
CKTRHNNNWYAMGYA		 Dap-seq
OMalley et al.(2016)
ANAC083_colamp_a 		0.881 0.667
NAC083
M07231_2.00 		Arabidopsis thaliana
TTNCKTRWNNHDYACGYWA
TWRCGTRHDNNWYAMGNAA		 Dap-seq
OMalley et al.(2016)
ANAC083_col_v3a 		0.881 0.667
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra005492.1-P NAC/NAM 15 134

Links

Other NAC/NAM family TFs
Other Brassica rapa TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_021_00051 Aquilegia coerulea Aquca_021_00051 I 0.879
ANAC083 Arabidopsis lyrata scaffold_601328.1 I 0.881
ANAC041 Arabidopsis lyrata fgenesh2_kg.4__1354__AT2G33480.1 I 0.929
NAC083 Arabidopsis thaliana AT5G13180 D 0.881
NAC041 Arabidopsis thaliana AT2G33480 I 0.929
Bostr.2902s0053 Boechera stricta Bostr.2902s0053 I 0.884
Bostr.23794s0753 Boechera stricta Bostr.23794s0753 I 0.929
Bo4g181990 Brassica oleracea Bo4g181990 I 0.924
Bo4g043670 Brassica oleracea Bo4g043670 I 0.961
Bra021856 Brassica rapa Bra021856 I 0.924
PK12461.1 Cannabis sativa PK12461.1 I 0.898
Cagra.0596s0010 Capsella grandiflora Cagra.0596s0010 I 0.884
Cagra.0301s0034 Capsella grandiflora Cagra.0301s0034 N 0.917
Carubv10023833m.g Capsella rubella Carubv10023833m.g N 0.917
Carubv10002548m.g Capsella rubella Carubv10002548m.g I 0.881
Cla001517 Citrullus lanatus Cla001517 I 0.904
Ciclev10032547m.g Citrus clementina Ciclev10032547m.g I 0.889
orange1.1g030727m.g Citrus sinensis orange1.1g030727m.g I 0.889
Cucsa.349370 Cucumis sativus Cucsa.349370 I 0.904
Eucgr.B03537 Eucalyptus grandis Eucgr.B03537 I 0.904
Thhalv10017152m.g Eutrema salsugineum Thhalv10017152m.g I 0.945
GLYMA18G53954 Glycine max GLYMA18G53954 I 0.882
GLYMA08G47520 Glycine max GLYMA08G47520 I 0.882
Gorai.005G195300 Gossypium raimondii Gorai.005G195300 I 0.905
Gorai.012G125500 Gossypium raimondii Gorai.012G125500 I 0.896
Lus10001809.g Linum usitatissimum Lus10001809.g I 0.873
Lus10002581.g Linum usitatissimum Lus10002581.g I 0.876
chr1.CM0017.80.nc Lotus japonicus chr1.CM0017.80.nc I 0.878
MDP0000126517 Malus domestica MDP0000126517 I 0.885
MDP0000130123 Malus domestica MDP0000130123 I 0.896
cassava12891.valid.m1 Manihot esculenta cassava12891.valid.m1 I 0.878
cassava1138.valid.m1 Manihot esculenta cassava1138.valid.m1 I 0.880
POPTR_0001s13380 Populus trichocarpa POPTR_0001s13380 I 0.900
POPTR_0003s16490 Populus trichocarpa POPTR_0003s16490 I 0.895
Pm007070 Prunus mume Pm007070 I 0.903
PRUPE_ppa010222mg Prunus persica PRUPE_ppa010222mg I 0.903
30128.m009035 Ricinus communis 30128.m009035 I 0.880
SapurV1A.0173s0020 Salix purpurea SapurV1A.0173s0020 I 0.894
SapurV1A.0453s0210 Salix purpurea SapurV1A.0453s0210 I 0.907
TCM_008477 Theobroma cacao TCM_008477 I 0.899
ANAC083 Vitis vinifera VIT_01s0146g00280 I 0.885