CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
LPERR01G34330
(
Leersia perrieri
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
LPERR01G34330
T293503_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC035
M07186_2.00
Arabidopsis thaliana
CBTNNNNNDYACGKMAHHN
NDDTKMCGTRHNNNNNAVG
Dap-seq
OMalley et al.(2016)
ANAC034_col
0.949
0.930
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LPERR01G34330.1
NAC/NAM
47
172
MPGFRFHPTEEELIEFYLRRKVEGKRFNVELITFLDLYRYDPWELPAMAAIGEKEWFFYVPRDRKYRNGDRPNRVTASGYWKATGADRMIRAENNRPIGLKKTLVFYSGKAPKGVRSSWIMNEYRL
LPERR01G34330.2
NAC/NAM
47
172
MPGFRFHPTEEELIEFYLRRKVEGKRFNVELITFLDLYRYDPWELPAMAAIGEKEWFFYVPRDRKYRNGDRPNRVTASGYWKATGADRMIRAENNRPIGLKKTLVFYSGKAPKGVRSSWIMNEYRL
Links
Other
NAC/NAM
family TFs
Other
Leersia perrieri
TFs
120 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PV04_09712
Capronia semiimmersa
PV04_09712
N
Z519_11402
Cladophialophora bantiana
Z519_11402
N
G647_08077
Cladophialophora carrionii
G647_08077
N
A1O5_10864
Cladophialophora psammophila
A1O5_10864
N
A1O7_09119
Cladophialophora yegresii
A1O7_09119
N
PV10_04205
Exophiala mesophila
PV10_04205
N
PV06_10585
Exophiala oligosperma
PV06_10585
N
PV08_02193
Exophiala spinifera
PV08_02193
N
Z517_01959
Fonsecaea pedrosoi
Z517_01959
N
FPSE_08121
Fusarium pseudograminearum
FPSE_08121
N
Z518_03482
Rhinocladiella mackenziei
Z518_03482
N
VHEMI03737
Torrubiella hemipterigena
VHEMI03737
N