CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0004s18860
(
Populus trichocarpa
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
POPTR_0004s18860
T295244_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0004s18860.1
NAC/NAM
10
137
LPGFRFHPTEEELLDFYLKNMVFGRKMRLDVIGYLNIYRHDPSELPGLSKVGEREWYFFVPRDRKHGNGGRPNRTTQNGFWKATGSDRKIVSLSDPKRMIGFRKTLVFYKGRAPRGSKTDWVMNEYRL
Links
Other
NAC/NAM
family TFs
Other
Populus trichocarpa
TFs
43 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LPERR11G02510
Leersia perrieri
LPERR11G02510
N
OBART10G04050
Oryza barthii
OBART10G04050
N
OGLUM10G03910
Oryza glumaepatula
OGLUM10G03910
N
OLONG_027283
Oryza longistaminata
OLONG_027283
N
ONIVA05G14200
Oryza nivara
ONIVA05G14200
I
OPUNC10G03390
Oryza punctata
OPUNC10G03390
N
ORUFI10G04240
Oryza rufipogon
ORUFI10G04240
N
Sb02g026510
Sorghum bicolor
Sb02g026510
I
Sb08g022560
Sorghum bicolor
Sb08g022560
I