Solyc04g005610.2 (Solanum lycopersicum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Solyc04g005610.2 T295842_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC029
M00973_2.00 		Arabidopsis thaliana
NBACGBMWNN
NNWKVCGTVN		 PBM
Lindemose et al.(2014)
NAP 		0.928 0.875
NAC029
M02369_2.00 		Arabidopsis thaliana
NRGTCAWNN
NNWTGACYN		 PBM
Weirauch et al.(2014)
pTH8397 		0.928 0.875
NAC029
M07180_2.00 		Arabidopsis thaliana
NCGTVHNNNWYACGBMA
TKVCGTRWNNNDBACGN		 Dap-seq
OMalley et al.(2016)
NAP_colamp_a 		0.928 0.875
NAC029
M07181_2.00 		Arabidopsis thaliana
WYACGBMAYYD
HRRTKVCGTRW		 Dap-seq
OMalley et al.(2016)
NAP_col_v3a 		0.928 0.875
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc04g005610.2.1 NAC/NAM 11 135

Links

Other NAC/NAM family TFs
Other Solanum lycopersicum TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
XM_002332506.1 Populus trichocarpa POPTR_0019s02070 N 0.000
POPTR_0019s02180 Populus trichocarpa POPTR_0019s02180 N 0.000
POPTR_0019s02190 Populus trichocarpa POPTR_0019s02190 N 0.000
POPTR_0060s00240 Populus trichocarpa POPTR_0060s00240 N 0.000
POPTR_0123s00220 Populus trichocarpa POPTR_0123s00220 N 0.000
POPTR_0123s00230 Populus trichocarpa POPTR_0123s00230 N 0.000
POPTR_0190s00220 Populus trichocarpa POPTR_0190s00220 N 0.000
POPTR_0019s02060 Populus trichocarpa POPTR_0019s02060 N 0.000
SapurV1A.4753s0010 Salix purpurea SapurV1A.4753s0010 N 0.000
SapurV1A.2188s0010 Salix purpurea SapurV1A.2188s0010 N 0.000
SapurV1A.2141s0020 Salix purpurea SapurV1A.2141s0020 N 0.000
SapurV1A.1860s0010 Salix purpurea SapurV1A.1860s0010 N 0.000
SapurV1A.1614s0020 Salix purpurea SapurV1A.1614s0020 N 0.000
SapurV1A.1254s0010 Salix purpurea SapurV1A.1254s0010 N 0.000
SapurV1A.1112s0010 Salix purpurea SapurV1A.1112s0010 N 0.000
SapurV1A.0880s0030 Salix purpurea SapurV1A.0880s0030 N 0.000
SapurV1A.0436s0160 Salix purpurea SapurV1A.0436s0160 N 0.000
SapurV1A.0436s0070 Salix purpurea SapurV1A.0436s0070 N 0.000
SapurV1A.0436s0030 Salix purpurea SapurV1A.0436s0030 N 0.000
SapurV1A.0436s0020 Salix purpurea SapurV1A.0436s0020 N 0.000
SapurV1A.0436s0010 Salix purpurea SapurV1A.0436s0010 N 0.000