CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

NAP *(Vitis vinifera)* NAC/NAM
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF02365 (NAM)	IPR003441	VIT_01s0026g02710	T296383_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
NAC029 M00973_2.00	Arabidopsis thaliana	NBACGBMWNN	NNWKVCGTVN	PBM Lindemose et al.(2014) NAP	0.948	0.902
NAC029 M02369_2.00	Arabidopsis thaliana	NRGTCAWNN	NNWTGACYN	PBM Weirauch et al.(2014) pTH8397	0.948	0.902
NAC029 M07180_2.00	Arabidopsis thaliana	NCGTVHNNNWYACGBMA	TKVCGTRWNNNDBACGN	Dap-seq OMalley et al.(2016) NAP_colamp_a	0.948	0.902
NAC029 M07181_2.00	Arabidopsis thaliana	WYACGBMAYYD	HRRTKVCGTRW	Dap-seq OMalley et al.(2016) NAP_col_v3a	0.948	0.902
Traes_5BL_CC18CAD72 M11085_2.00	Triticum aestivum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$NAC691_01	0.885	0.759
For this family, TFs with SR scores > 0.870* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
VIT_01s0026g02710.t01	NAC/NAM	10	134	PPGFRFHPTDEELIMYYLKNQATSKPCPVSIIPEVDIYKFEPWELPEKAEFGENEWYFFSPRDRKYPNGARPNRATVSGYWKATGTDKAIYSGAKYVGVKKALVFYKGRPPKGIKTDWIMHEYRL

Links
Other NAC/NAM family TFs
Other *Vitis vinifera* TFs