CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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anac047
(
Vitis vinifera
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
VIT_08s0007g07670
T296406_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC047
M07198_2.00
Arabidopsis thaliana
CACGB
VCGTG
Dap-seq
OMalley et al.(2016)
ANAC047_colamp_a
0.913
0.821
NAC047
M07199_2.00
Arabidopsis thaliana
WNNNWYACGYMWYYN
NRRWKRCGTRWNNNW
Dap-seq
OMalley et al.(2016)
ANAC047_col
0.913
0.821
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VIT_08s0007g07670.t01
NAC/NAM
9
140
PPGFRFHPTDEELILHYLSKKVTSTPFPVSIIADVDIYKFDPWELPGKAVFGEKEWYFFSPRDRKYPNGLRPNRAAASGYWKATGTDKTIVAASSIGGGGHGHIGVKKALVFYQGRPPKGIKTNWIMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Vitis vinifera
TFs
67 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MLOC_15181
Hordeum vulgare
MLOC_15181
N
MLOC_43730
Hordeum vulgare
MLOC_43730
N
Traes_4AL_F023A8691
Triticum aestivum
Traes_4AL_F023A8691
N
Traes_4DS_2B4E99BE4
Triticum aestivum
Traes_4DS_2B4E99BE4
N
Traes_4DS_82065CB2C
Triticum aestivum
Traes_4DS_82065CB2C
N
TRIUR3_05949
Triticum urartu
TRIUR3_05949
N
TRIUR3_08697
Triticum urartu
TRIUR3_08697
N