CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cassava11584.m1
(
Manihot esculenta
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
cassava11584.m1
T296816_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
anac075
M07223_2.00
Arabidopsis thaliana
CTTSWNNNWYAMGYT
ARCKTRWNNNWSAAG
Dap-seq
OMalley et al.(2016)
ANAC075_col_a
0.994
0.982
PK27085.1
M01293_2.00
Cannabis sativa
AATTTATT
AATAAATT
PBM
Lambert et al.(2019)
pTH11262
0.994
0.991
NAC010
M07167_2.00
Arabidopsis thaliana
NWWNCTTSWNNNWYAMGHHWYH
DRWDDCKTRWNNNWSAAGNWWN
Dap-seq
OMalley et al.(2016)
SND3_colamp_a
0.972
0.746
NAC010
M07168_2.00
Arabidopsis thaliana
CKTSWNNNWYAMGYW
WRCKTRWNNNWSAMG
Dap-seq
OMalley et al.(2016)
SND3_col_b
0.972
0.746
NAC073
M07221_2.00
Arabidopsis thaliana
CTTSWNNNWYAMGYH
DRCKTRWNNNWSAAG
Dap-seq
OMalley et al.(2016)
SND2_col_a
0.949
0.728
NAC073
M07222_2.00
Arabidopsis thaliana
CKTSWNNNWYACGYW
WRCGTRWNNNWSAMG
Dap-seq
OMalley et al.(2016)
SND2_colamp_a
0.949
0.728
PK11990.1
M01290_2.00
Cannabis sativa
DNAHDNHDNN
NNHDNHDTNH
PBM
Lambert et al.(2019)
pTH11336
0.929
0.763
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava11584.m1
NAC/NAM
47
188
PAGVKFDPTDQELIEHLEAKVEAKDMKSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQTECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHL
Links
Other
NAC/NAM
family TFs
Other
Manihot esculenta
TFs
350 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BAUCODRAFT_50680
Baudoinia compniacensis
BAUCODRAFT_50680
N
BBA_01414
Beauveria bassiana
BBA_01414
I
COCC4DRAFT_53548
Bipolaris maydis
COCC4DRAFT_53548
I
COCMIDRAFT_36857
Bipolaris oryzae
COCMIDRAFT_36857
I
COCSADRAFT_116952
Bipolaris sorokiniana
COCSADRAFT_116952
I
COCVIDRAFT_97328
Bipolaris victoriae
COCVIDRAFT_97328
I
COCCADRAFT_37638
Bipolaris zeicola
COCCADRAFT_37638
I
estExt_Genewise1Plus.C_270143
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_270143
I
CCM_00085
Cordyceps militaris
CCM_00085
I
DOTSEDRAFT_70728
Dothistroma septosporum
DOTSEDRAFT_70728
N
PV05_07550
Exophiala xenobiotica
PV05_07550
I
LEMA_P067560.1
Leptosphaeria maculans
LEMA_P067560.1
I
estExt_Genewise1Plus.C_chr_10224
Mycosphaerella graminicola
estExt_Genewise1Plus.C_chr_10224
N
SNOG_00452
Phaeosphaeria nodorum
SNOG_00452
I
MYCFIDRAFT_107517
Pseudocercospora fijiensis
MYCFIDRAFT_107517
N
PTT_13781
Pyrenophora teres
PTT_13781
I
PTRG_10320
Pyrenophora triticirepentis
PTRG_10320
I
SETTUDRAFT_134649
Setosphaeria turcica
SETTUDRAFT_134649
I
SEPMUDRAFT_148394
Sphaerulina musiva
SEPMUDRAFT_148394
N
SNOG_00452
Stagonospora nodorum
SNOG_00452
I
VHEMI05022
Torrubiella hemipterigena
VHEMI05022
I
TRIATDRAFT_80549
Trichoderma atroviride
TRIATDRAFT_80549
I
TRIREDRAFT_108872
Trichoderma reesei
TRIREDRAFT_108872
I
TRIVIDRAFT_33222
Trichoderma virens
TRIVIDRAFT_33222
I
PV09_07689
Verruconis gallopava
PV09_07689
N
Mycgr3G65005
Zymoseptoria tritici
Mycgr3G65005
N