Cucsa.158180 (Cucumis sativus)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Cucsa.158180 T296976_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC59
M11080_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ANAC059_01 		0.891 0.833
NAC92
M00979_2.00 		Arabidopsis thaliana
NNDYACGBHA
TDVCGTRHNN		 PBM
Lindemose et al.(2014)
ANAC092 		0.887 0.842
NAC92
M00730_2.00 		Arabidopsis thaliana
DYACGNHAN
NTDNCGTRH		 PBM
Chang et al.(2013)
pTH7335 		0.887 0.842
NAC92
M07234_2.00 		Arabidopsis thaliana
TWNCKTGHNNHDCAMGYWAY
RTWRCKTGHDNNDCAMGNWA		 Dap-seq
OMalley et al.(2016)
ANAC092_colamp_a 		0.887 0.842
NAC92
M07235_2.00 		Arabidopsis thaliana
WRCKTGTNNNDCAMG
CKTGHNNNACAMGYW		 Dap-seq
OMalley et al.(2016)
ANAC092_col_v3a 		0.887 0.842
NAC054
M07205_2.00 		Arabidopsis thaliana
CKTVHNNHRCACGYHANCW
WGNTDRCGTGYDNNDBAMG		 Dap-seq
OMalley et al.(2016)
CUC1_colamp_a 		0.872 0.789
NAC054
M07206_2.00 		Arabidopsis thaliana
TWNCKTGHNNNDCAMG
CKTGHNNNDCAMGNWA		 Dap-seq
OMalley et al.(2016)
CUC1_col_v31 		0.872 0.789
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.158180.1 NAC/NAM 28 152
Cucsa.158180.2 NAC/NAM 2 75

Links

Other NAC/NAM family TFs
Other Cucumis sativus TFs

50 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CUC1 Arabidopsis lyrata fgenesh2_kg.3__1650__AT3G15170.1 I 0.872
ATNAC3 Arabidopsis lyrata fgenesh2_kg.5__665__AT3G29035.1 I 0.891
ATNAC2 Arabidopsis lyrata fgenesh2_kg.7__3461__AT5G39610.1 I 0.887
NAC59 Arabidopsis thaliana AT3G29035 D 0.891
NAC92 Arabidopsis thaliana AT5G39610 D 0.887
NAC054 Arabidopsis thaliana AT3G15170 D 0.872
Bostr.28625s0180 Boechera stricta Bostr.28625s0180 I 0.872
Bostr.10058s0039 Boechera stricta Bostr.10058s0039 I 0.887
Bo00578s090 Brassica oleracea Bo00578s090 I 0.873
Bo3g066690 Brassica oleracea Bo3g066690 I 0.872
Bo9g008770 Brassica oleracea Bo9g008770 I 0.870
Bra001586 Brassica rapa Bra001586 I 0.872
Bra025658 Brassica rapa Bra025658 I 0.873
Bra028435 Brassica rapa Bra028435 I 0.877
Bra036223 Brassica rapa Bra036223 I 0.877
PK26741.1 Cannabis sativa PK26741.1 I 0.891
Cagra.0007s0060 Capsella grandiflora Cagra.0007s0060 I 0.872
Carubv10005201m.g Capsella rubella Carubv10005201m.g I 0.879
Carubv10014276m.g Capsella rubella Carubv10014276m.g I 0.872
Carubv10017737m.g Capsella rubella Carubv10017737m.g I 0.915
Cla010484 Citrullus lanatus Cla010484 I 0.917
Cla017258 Citrullus lanatus Cla017258 I 0.884
Cla004358 Citrullus lanatus Cla004358 I 0.920
Ciclev10012093m.g Citrus clementina Ciclev10012093m.g I 0.878
orange1.1g018950m.g Citrus sinensis orange1.1g018950m.g I 0.878
Cucsa.032500 Cucumis sativus Cucsa.032500 I 0.924
Cucsa.338700 Cucumis sativus Cucsa.338700 I 0.890
Eucgr.I01958 Eucalyptus grandis Eucgr.I01958 I 0.882
Thhalv10004583m.g Eutrema salsugineum Thhalv10004583m.g I 0.884
Thhalv10021186m.g Eutrema salsugineum Thhalv10021186m.g I 0.872
Thhalv10027874m.g Eutrema salsugineum Thhalv10027874m.g I 0.877
gene04424-v1.0-hybrid Fragaria vesca gene04424-v1.0-hybrid I 0.875
GLYMA04G33270 Glycine max GLYMA04G33270 I 0.873
GLYMA06G21020 Glycine max GLYMA06G21020 I 0.875
Gorai.007G038100 Gossypium raimondii Gorai.007G038100 I 0.878
Gorai.007G079900 Gossypium raimondii Gorai.007G079900 I 0.883
MDP0000276765 Malus domestica MDP0000276765 I 0.889
MDP0000129335 Malus domestica MDP0000129335 I 0.898
MDP0000232050 Malus domestica MDP0000232050 I 0.898
mgf003818m Mimulus guttatus mgf003818m I 0.872
Pm024887 Prunus mume Pm024887 I 0.874
Pm015914 Prunus mume Pm015914 I 0.884
PRUPE_ppa007653mg Prunus persica PRUPE_ppa007653mg I 0.877
PRUPE_ppa007883mg Prunus persica PRUPE_ppa007883mg I 0.887
Solyc02g088180.2 Solanum lycopersicum Solyc02g088180.2 I 0.882
PGSC0003DMG400001338 Solanum tuberosum PGSC0003DMG400001338 I 0.882
TCM_018621 Theobroma cacao TCM_018621 I 0.887
TRAES3BF020100120CFD_g Triticum aestivum TRAES3BF020100120CFD_g I 0.871
VIT_14s0108g01070 Vitis vinifera VIT_14s0108g01070 I 0.888
VIT_17s0000g06400 Vitis vinifera VIT_17s0000g06400 I 0.878