Cagra.9217s0021 (Capsella grandiflora)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Cagra.9217s0021 T297448_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC078
M02372_2.00 		Arabidopsis thaliana
NNRCAMGHMANN
NNTKDCKTGYNN		 PBM
Weirauch et al.(2014)
pTH7209 		0.963 0.991
NAC078
M07226_2.00 		Arabidopsis thaliana
TTDCTTGNDNNDCAAG
CTTGHNNHNCAAGHAA		 Dap-seq
OMalley et al.(2016)
NAC2_colamp_a 		0.963 0.991
NAC078
M07227_2.00 		Arabidopsis thaliana
DTTWCTTGNNNNRCAAG
CTTGYNNNNCAAGWAAH		 Dap-seq
OMalley et al.(2016)
NAC2_col_v3a 		0.963 0.991
NAC078
M11083_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$NAC078_Q2 		0.963 0.991
NAC053
M07202_2.00 		Arabidopsis thaliana
TTWCTTGNNNVRCAAG
CTTGYBNNNCAAGWAA		 Dap-seq
OMalley et al.(2016)
ANAC053_colamp_a 		0.956 0.956
NAC053
M07203_2.00 		Arabidopsis thaliana
TTWCTTGNNNVRCAAGH
DCTTGYBNNNCAAGWAA		 Dap-seq
OMalley et al.(2016)
ANAC053_col 		0.956 0.956
NAC053
M11079_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT3G10500_Q2 		0.956 0.956
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.9217s0021.1.p NAC/NAM 10 136

Links

Other NAC/NAM family TFs
Other Capsella grandiflora TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ASIM_0001581901 Anisakis simplex ASIM_0001581901 N 0.000
AARA005398 Anopheles arabiensis AARA005398 N 0.000
AATE013347 Anopheles atroparvus AATE013347 N 0.000
ACUA015214 Anopheles culicifacies ACUA015214 N 0.000
ADIR004989 Anopheles dirus ADIR004989 N 0.000
AFAF002833 Anopheles farauti AFAF002833 N 0.000
AFUN008632 Anopheles funestus AFUN008632 N 0.000
AMAM016984 Anopheles maculatus AMAM016984 N 0.000
ASIS022569 Anopheles sinensis ASIS022569 N 0.000
ASIS022602 Anopheles sinensis ASIS022602 N 0.000
ASTEI07322 Anopheles stephensi ASTEI07322 N 0.000
ACEP24768 Atta cephalotes ACEP24768 N 0.000
ACEP13748 Atta cephalotes ACEP13748 N 0.000
BGIBMGA006133 Bombyx mori BGIBMGA006133 N 0.000
gw.266.126.1 Branchiostoma floridae gw.266.126.1 N 0.000
CLEC007059 Cimex lectularius CLEC007059 N 0.000
CLEC007062 Cimex lectularius CLEC007062 N 0.000
CpipJ_CPIJ002496 Culex pipiens CpipJ_CPIJ002496 N 0.000
CpipJ_CPIJ012536 Culex pipiens CpipJ_CPIJ012536 N 0.000
CPIJ012536 Culex quinquefasciatus CPIJ012536 N 0.000
CPIJ002496 Culex quinquefasciatus CPIJ002496 N 0.000
DME_0000858201 Dracunculus medinensis DME_0000858201 N 0.000
GPUH_0002286201 Gongylonema pulchrum GPUH_0002286201 N 0.000
ISCW020918 Ixodes scapularis ISCW020918 N 0.000
LDEC020738 Leptinotarsa decemlineata LDEC020738 N 0.000
LCUP009738 Lucilia cuprina LCUP009738 N 0.000
MESCA008698 Megaselia scalaris MESCA008698 N 0.000
MCINX006866 Melitaea cinxia MCINX006866 N 0.000
Myotis_brandtii_Gfi1_10004111 Myotis brandtii Myotis_brandtii_Gfi1_10004111 N 0.000
Ocbimv22006972m.g Octopus bimaculoides Ocbimv22006972m.g N 0.000
nOo.2.0.1.g10808 Onchocerca ochengi nOo.2.0.1.g10808 N 0.000
PPAI008930 Phlebotomus papatasi PPAI008930 N 0.000
scaffold152-EXSNAP2012.15 Pristionchus exspectatus scaffold152-EXSNAP2012.15 N 0.000
RPRC005967 Rhodnius prolixus RPRC005967 N 0.000
RPRC005969 Rhodnius prolixus RPRC005969 N 0.000
SMRZ_0001144901 Schistosoma margrebowiei SMRZ_0001144901 N 0.000
SINV20314 Solenopsis invicta SINV20314 N 0.000
SINV24825 Solenopsis invicta SINV24825 N 0.000
SPER_0000300601 Spirometra erinaceieuropaei SPER_0000300601 N 0.000
L889_g12163 Steinernema feltiae L889_g12163 N 0.000
L893_g23375 Steinernema glaseri L893_g23375 N 0.000
SMAR014254 Strigamia maritima SMAR014254 N 0.000
SMAR014824 Strigamia maritima SMAR014824 N 0.000