Carubv10002548m.g (Capsella rubella)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Carubv10002548m.g T297457_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC083
M02374_2.00 		Arabidopsis thaliana
WYACGYAANN
NNTTRCGTRW		 PBM
Weirauch et al.(2014)
pTH7308 		0.953 0.943
NAC083
M07230_2.00 		Arabidopsis thaliana
TRCKTRWNNNDYAMG
CKTRHNNNWYAMGYA		 Dap-seq
OMalley et al.(2016)
ANAC083_colamp_a 		0.953 0.943
NAC083
M07231_2.00 		Arabidopsis thaliana
TTNCKTRWNNHDYACGYWA
TWRCGTRHDNNWYAMGNAA		 Dap-seq
OMalley et al.(2016)
ANAC083_col_v3a 		0.953 0.943
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10002548m NAC/NAM 15 138

Links

Other NAC/NAM family TFs
Other Capsella rubella TFs

50 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Kpol_1020p22 Vanderwaltozyma polyspora Kpol_1020p22 N