CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Carubv10017870m.g
(
Capsella rubella
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Carubv10017870m.g
T297521_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10017870m
NAC/NAM
20
150
PVGFRFYPTEVELLTFYLRIQLGGGSATIHSLIPILDVFSVEPTQLPNLAGERCRGDAEQWLFFVPRQEREARGGRPSRTTRSGYWKATGSPGPVFSPDNRVIGVKKTMVFYTGKAPTGRKTKWKMNEYKA
Links
Other
NAC/NAM
family TFs
Other
Capsella rubella
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MLOC_25058
Hordeum vulgare
MLOC_25058
N
LPERR01G07860
Leersia perrieri
LPERR01G07860
N
BGIOSGA003083
Oryza indica
BGIOSGA003083
N
OS01G0234100
Oryza sativa
OS01G0234100
N
Pavir.Ea00041
Panicum virgatum
Pavir.Ea00041
N
Pavir.Eb00031
Panicum virgatum
Pavir.Eb00031
N
Traes_2AS_FC3F1F39A
Triticum aestivum
Traes_2AS_FC3F1F39A
N
Traes_2DS_6584E8617
Triticum aestivum
Traes_2DS_6584E8617
N
Traes_3AS_16C02FAE7
Triticum aestivum
Traes_3AS_16C02FAE7
N
Traes_3B_30A3E17C6
Triticum aestivum
Traes_3B_30A3E17C6
N
Traes_3DS_ECB844CBC
Triticum aestivum
Traes_3DS_ECB844CBC
N