CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ciclev10019368m.g
(
Citrus clementina
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Ciclev10019368m.g
T297610_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ciclev10019368m
NAC/NAM
10
136
PLGFRFRPTDEELVDFYLRMKINGHNDEVSVISEIDVCKREPWDLPDLSVIKTKDREWFFFCPQDRKYPNGHRLNRATAAGYWKATGKDRKIKSGNHLIGMKKTLVFHMGRAPKGKRTNWVMHEYRA
Ciclev10019378m
NAC/NAM
10
136
PLGFRFRPTDEELVDFYLRMKINGHNDEVSVISEIDVCKREPWDLPDLSVIKTKDREWFFFCPQDRKYPNGHRLNRATAAGYWKATGKDRKIKSGNHLIGMKKTLVFHMGRAPKGKRTNWVMHEYRA
Ciclev10019769m
NAC/NAM
10
136
PLGFRFRPTDEELVDFYLRMKINGHNDEVSVISEIDVCKREPWDLPDLSVIKTKDREWFFFCPQDRKYPNGHRLNRATAAGYWKATGKDRKIKSGNHLIGMKKTLVFHMGRAPKGKRTNWVMHEYRA
Ciclev10019781m
NAC/NAM
10
136
PLGFRFRPTDEELVDFYLRMKINGHNDEVSVISEIDVCKREPWDLPDLSVIKTKDREWFFFCPQDRKYPNGHRLNRATAAGYWKATGKDRKIKSGNHLIGMKKTLVFHMGRAPKGKRTNWVMHEYRA
Links
Other
NAC/NAM
family TFs
Other
Citrus clementina
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PK15363.1
Cannabis sativa
PK15363.1
N
0.894
Cla002432
Citrullus lanatus
Cla002432
N
0.928
orange1.1g007393m.g
Citrus sinensis
orange1.1g007393m.g
N
0.972
Cucsa.273280
Cucumis sativus
Cucsa.273280
N
0.930
gene12442-v1.0-hybrid
Fragaria vesca
gene12442-v1.0-hybrid
N
0.905
GLYMA02G38710
Glycine max
GLYMA02G38710
N
0.888
GLYMA04G40450
Glycine max
GLYMA04G40450
N
0.875
MDP0000266908
Malus domestica
MDP0000266908
I
0.873
cassava11768.valid.m1
Manihot esculenta
cassava11768.valid.m1
N
0.902
MTR_3g093040
Medicago truncatula
MTR_3g093040
N
0.909
mgf022344m
Mimulus guttatus
mgf022344m
I
0.885
29764.m000758
Ricinus communis
29764.m000758
N
0.888
SapurV1A.0326s0320
Salix purpurea
SapurV1A.0326s0320
N
0.893