Ciclev10032547m.g (Citrus clementina)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Ciclev10032547m.g T297644_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC083
M02374_2.00 		Arabidopsis thaliana
WYACGYAANN
NNTTRCGTRW		 PBM
Weirauch et al.(2014)
pTH7308 		0.921 0.858
NAC083
M07230_2.00 		Arabidopsis thaliana
TRCKTRWNNNDYAMG
CKTRHNNNWYAMGYA		 Dap-seq
OMalley et al.(2016)
ANAC083_colamp_a 		0.921 0.858
NAC083
M07231_2.00 		Arabidopsis thaliana
TTNCKTRWNNHDYACGYWA
TWRCGTRHDNNWYAMGNAA		 Dap-seq
OMalley et al.(2016)
ANAC083_col_v3a 		0.921 0.858
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10032547m NAC/NAM 15 138
Ciclev10032865m NAC/NAM 15 138

Links

Other NAC/NAM family TFs
Other Citrus clementina TFs

57 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g08682 Acanthocheilonema viteae nAv.1.0.1.g08682 N
ASIM_0001486401 Anisakis simplex ASIM_0001486401 N
ALUE_0001596201 Ascaris lumbricoides ALUE_0001596201 N
Bm7952 Brugia malayi Bm7952 N
BTMF_0000608301 Brugia timori BTMF_0000608301 N
BXY_0902400 Bursaphelenchus xylophilus BXY_0902400 N
DICVIV_04781 Dictyocaulus viviparus DICVIV_04781 N
nDi.2.2.2.g08138 Dirofilaria immitis nDi.2.2.2.g08138 N
DME_0000790001 Dracunculus medinensis DME_0000790001 N
EEL_0000910601 Elaeophora elaphi EEL_0000910601 N
EVEC_0000789501 Enterobius vermicularis EVEC_0000789501 N
GPLIN_001448000 Globodera pallida GPLIN_001448000 N
GPUH_0000307001 Gongylonema pulchrum GPUH_0000307001 N
HCOI01463400 Haemonchus contortus HCOI01463400 N
Hba_17824 Heterorhabditis bacteriophora Hba_17824 N
nLs.2.1.2.g07630 Litomosoides sigmodontis nLs.2.1.2.g07630 N
augustus_masked-nMf.1.1.scaf37685-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf37685-processed-gene-0.0 N
MhA1_Contig363.frz3.gene3 Meloidogyne hapla MhA1_Contig363.frz3.gene3 N
Minc16565 Meloidogyne incognita Minc16565 N
Minc14558 Meloidogyne incognita Minc14558 N
NECAME_04566 Necator americanus NECAME_04566 N
OESDEN_05920 Oesophagostomum dentatum OESDEN_05920 N
OFLC_0001164501 Onchocerca flexuosa OFLC_0001164501 N
nOo.2.0.1.g10333 Onchocerca ochengi nOo.2.0.1.g10333 N
PTRK_0001373700 Parastrongyloides trichosuri PTRK_0001373700 N
L596_g6744 Steinernema carpocapsae L596_g6744 N
L889_g33286 Steinernema feltiae L889_g33286 N
L893_g10065 Steinernema glaseri L893_g10065 N
L898_g19328 Steinernema monticolum L898_g19328 N
L892_g5882 Steinernema scapterisci L892_g5882 N
SPAL_0001565400 Strongyloides papillosus SPAL_0001565400 N
SSTP_0001216500 Strongyloides stercoralis SSTP_0001216500 N
SVE_0219500 Strongyloides venezuelensis SVE_0219500 N
SVUK_0000752301 Strongylus vulgaris SVUK_0000752301 N
TELCIR_24277 Teladorsagia circumcincta TELCIR_24277 N
TCLT_0000261301 Thelazia callipaeda TCLT_0000261301 N
TCNE_0001073501 Toxocara canis TCNE_0001073501 N
WUBG_04941 Wuchereria bancrofti WUBG_04941 N