CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene20500-v1.0-hybrid
(
Fragaria vesca
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
gene20500-v1.0-hybrid
T297966_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna20500.1-v1.0-hybrid
NAC/NAM
9
143
LPGQRFCPMDDELVLFYLKPMLSGENVPGGNRVVFDCELYGKQEPWEIWEDFKTRRPHDLRLNKDIYFFTQHKTMSSTDKRIRRNVGSGTWKSDDSGKEVVSVENGRVVGLKKRLTYKNEDSVQNGCWILYEFFL
Links
Other
NAC/NAM
family TFs
Other
Fragaria vesca
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
augustus_masked-nMf.1.1.scaf00453-processed-gene-0.1
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf00453-processed-gene-0.1
N
maker-nMf.1.1.scaf07164-augustus-gene-0.4
Meloidogyne floridensis
maker-nMf.1.1.scaf07164-augustus-gene-0.4
N
snap_masked-nMf.1.1.scaf20243-processed-gene-0.1
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf20243-processed-gene-0.1
N
Minc14217
Meloidogyne incognita
Minc14217
N
Minc15750
Meloidogyne incognita
Minc15750
N