CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
gene25783-v1.0-hybrid
(
Fragaria vesca
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
gene25783-v1.0-hybrid
T297993_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna25783.1-v1.0-hybrid
NAC/NAM
19
159
PVGFRFMPTDEELVRYYLMNKACFRAVPVADAIQEIDATRFYSNHPKNLVTFSNGEREWFFFIHEDDENYSGSCRSHAQRRRNVREVGNGLGFWKPSGSENPIYSKDGNVFATKIFLTYFSGSCHSKKPKRTHWKMVEYHL
Links
Other
NAC/NAM
family TFs
Other
Fragaria vesca
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00017p00255350
Amborella trichopoda
AMTR_s00017p00255350
I
0.871
evm.TU.supercontig_94.23
Carica papaya
evm.TU.supercontig_94.23
N
0.874
gene25794-v1.0-hybrid
Fragaria vesca
gene25794-v1.0-hybrid
N
0.994
GSMUA_Achr4G32010_001
Musa acuminata
GSMUA_Achr4G32010_001
I
0.899
GSMUA_Achr6G31580_001
Musa acuminata
GSMUA_Achr6G31580_001
I
0.903
GSMUA_Achr9G10040_001
Musa acuminata
GSMUA_Achr9G10040_001
I
0.887
fgenesh1_pg.scaffold_182000024
Physcomitrella patens
fgenesh1_pg.scaffold_182000024
I
0.873
gw1.6.394.1
Physcomitrella patens
gw1.6.394.1
I
0.875
Pm024976
Prunus mume
Pm024976
N
0.985