CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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orange1.1g007393m.g
(
Citrus sinensis
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
orange1.1g007393m.g
T298631_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g007393m
NAC/NAM
10
136
PLGFRFRPTDEELVDFYLRMKINGHNDEVSVISEIDVCKREPWDLPDLSVIKTKDREWFFFCPQDRKYPNGHRLNRATAAGYWKATGKDRKIKSGNHLIGMKKTLVFHMGRAPKGKRTNWVMHEYRA
orange1.1g007432m
NAC/NAM
10
136
PLGFRFRPTDEELVDFYLRMKINGHNDEVSVISEIDVCKREPWDLPDLSVIKTKDREWFFFCPQDRKYPNGHRLNRATAAGYWKATGKDRKIKSGNHLIGMKKTLVFHMGRAPKGKRTNWVMHEYRA
orange1.1g008125m
NAC/NAM
10
99
PLGFRFRPTDEELVDFYLRMKINGHNDEVSVISEIDVCKREPWDLPDLSVIKTKDREWFFFCPQDRKYPNGHRLNRATAAGYWKATGKRT
orange1.1g008125m
NAC/NAM
96
108
GKRTNWVMHEYRA
orange1.1g008830m
NAC/NAM
12
83
ANGSPGICLDRKYPNGHRLNRATAAGYWKATGKDRKIKSGNHLIGMKKTLVFHMGRAPKGKRTNWVMHEYRA
Links
Other
NAC/NAM
family TFs
Other
Citrus sinensis
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCDUO_08441
Ancylostoma duodenale
ANCDUO_08441
N
ACOC_0000581901
Angiostrongylus costaricensis
ACOC_0000581901
N
BTMF_0000211801
Brugia timori
BTMF_0000211801
N
DME_0000275701
Dracunculus medinensis
DME_0000275701
N
EEL_0001053001
Elaeophora elaphi
EEL_0001053001
N
GPUH_0001163001
Gongylonema pulchrum
GPUH_0001163001
N
nLs.2.1.2.g09068
Litomosoides sigmodontis
nLs.2.1.2.g09068
N
NBR_0001150801
Nippostrongylus brasiliensis
NBR_0001150801
N
OESDEN_02672
Oesophagostomum dentatum
OESDEN_02672
N
nOo.2.0.1.g07408
Onchocerca ochengi
nOo.2.0.1.g07408
N
WBGene00241638
Onchocerca volvulus
WBGene00241638
N
SVUK_0000292101
Strongylus vulgaris
SVUK_0000292101
N
TCNE_0000372001
Toxocara canis
TCNE_0000372001
N
WUBG_13401
Wuchereria bancrofti
WUBG_13401
N