CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Ab01268
(
Panicum virgatum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Pavir.Ab01268
T298751_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ab01268.1.p
NAC/NAM
11
148
PTGVHFRPDDDELVEFYLLPRARGEPAPFPAGVVVVDDDAAGSTLPWELLDRHGRGADDEAYFLVPGTATASRKSPAPARTQERGCGGGGTWKSQKRLAHGGSRVDDAGEKVCWSRHNLNLHMGRGESGGSVGSATAH
Links
Other
NAC/NAM
family TFs
Other
Panicum virgatum
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Aa01831
Panicum virgatum
Pavir.Aa01831
N
0.985
Pavir.J28923
Panicum virgatum
Pavir.J28923
N
0.957
Pavir.J38077
Panicum virgatum
Pavir.J38077
N
0.957
Si019235m.g
Setaria italica
Si019235m.g
N
0.877
Si019271m.g
Setaria italica
Si019271m.g
N
0.877
Si019409m.g
Setaria italica
Si019409m.g
N
0.877
Si019546m.g
Setaria italica
Si019546m.g
N
0.873
Si019812m.g
Setaria italica
Si019812m.g
N
0.877
Si020174m.g
Setaria italica
Si020174m.g
N
0.877