Pavir.Ea03596 (Panicum virgatum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Pavir.Ea03596 T298822_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC035
M07186_2.00 		Arabidopsis thaliana
CBTNNNNNDYACGKMAHHN
NDDTKMCGTRHNNNNNAVG		 Dap-seq
OMalley et al.(2016)
ANAC034_col 		0.949 0.930
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ea03596.1.p NAC/NAM 63 188

Links

Other NAC/NAM family TFs
Other Panicum virgatum TFs

120 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_01256 Aegilops tauschii F775_01256 I 0.965
F775_03877 Aegilops tauschii F775_03877 I 0.953
AMTR_s00059p00187950 Amborella trichopoda AMTR_s00059p00187950 I 0.937
AMTR_s00099p00163300 Amborella trichopoda AMTR_s00099p00163300 I 0.937
Aquca_014_00018 Aquilegia coerulea Aquca_014_00018 I 0.964
ANAC034 Arabidopsis lyrata fgenesh2_kg.5__152__AT2G02450.1 I 0.949
NAC035 Arabidopsis thaliana AT2G02450 D 0.949
Bostr.0556s0069 Boechera stricta Bostr.0556s0069 I 0.949
BRADI2G25150 Brachypodium distachyon BRADI2G25150 I 0.953
BRADI2G57297 Brachypodium distachyon BRADI2G57297 I 0.964
Bo2g136280 Brassica oleracea Bo2g136280 I 0.949
Bo7g080470 Brassica oleracea Bo7g080470 I 0.949
Bo9g071690 Brassica oleracea Bo9g071690 I 0.947
Bra017416 Brassica rapa Bra017416 I 0.947
Bra024818 Brassica rapa Bra024818 I 0.949
Bra026595 Brassica rapa Bra026595 I 0.949
PK24240.1 Cannabis sativa PK24240.1 I 0.961
Cagra.0534s0046 Capsella grandiflora Cagra.0534s0046 I 0.949
Carubv10017334m.g Capsella rubella Carubv10017334m.g I 0.949
Ca_18171 Cicer arietinum Ca_18171 I 0.953
Cla004630 Citrullus lanatus Cla004630 I 0.961
Ciclev10001346m.g Citrus clementina Ciclev10001346m.g I 0.961
Ciclev10001401m.g Citrus clementina Ciclev10001401m.g I 0.961
orange1.1g016095m.g Citrus sinensis orange1.1g016095m.g I 0.961
orange1.1g046996m.g Citrus sinensis orange1.1g046996m.g I 0.961
Cucsa.260400 Cucumis sativus Cucsa.260400 I 0.961
Eucgr.G00054 Eucalyptus grandis Eucgr.G00054 I 0.960
Thhalv10004330m.g Eutrema salsugineum Thhalv10004330m.g I 0.949
gene29260-v1.0-hybrid Fragaria vesca gene29260-v1.0-hybrid I 0.965
GLYMA07G40140 Glycine max GLYMA07G40140 I 0.953
GLYMA17G00650 Glycine max GLYMA17G00650 I 0.953
Gorai.010G142400 Gossypium raimondii Gorai.010G142400 I 0.963
Gorai.011G090000 Gossypium raimondii Gorai.011G090000 I 0.961
MLOC_57215 Hordeum vulgare MLOC_57215 I 0.964
MLOC_69621 Hordeum vulgare MLOC_69621 I 0.953
LPERR01G34330 Leersia perrieri LPERR01G34330 I 0.966
LPERR05G13320 Leersia perrieri LPERR05G13320 I 0.953
LPERR08G01330 Leersia perrieri LPERR08G01330 I 0.915
Lus10003366.g Linum usitatissimum Lus10003366.g N 0.873
Lus10003367.g Linum usitatissimum Lus10003367.g I 0.961
Lus10008419.g Linum usitatissimum Lus10008419.g I 0.961
Lus10008420.g Linum usitatissimum Lus10008420.g I 0.926
Lus10008897.g Linum usitatissimum Lus10008897.g I 0.957
Lus10023208.g Linum usitatissimum Lus10023208.g I 0.965
chr4.CM0525.60.nd Lotus japonicus chr4.CM0525.60.nd I 0.953
MDP0000189394 Malus domestica MDP0000189394 I 0.963
MDP0000679946 Malus domestica MDP0000679946 I 0.963
cassava17150.m1 Manihot esculenta cassava17150.m1 I 0.961
cassava23178.valid.m1 Manihot esculenta cassava23178.valid.m1 I 0.961
MTR_4g134460 Medicago truncatula MTR_4g134460 I 0.953
mgf015326m Mimulus guttatus mgf015326m I 0.930
GSMUA_Achr10G04320_001 Musa acuminata GSMUA_Achr10G04320_001 I 0.910
GSMUA_Achr10G10690_001 Musa acuminata GSMUA_Achr10G10690_001 I 0.923
GSMUA_Achr11G08970_001 Musa acuminata GSMUA_Achr11G08970_001 I 0.958
GSMUA_Achr11G26450_001 Musa acuminata GSMUA_Achr11G26450_001 N 0.871
GSMUA_Achr3G21690_001 Musa acuminata GSMUA_Achr3G21690_001 I 0.925
GSMUA_Achr5G17060_001 Musa acuminata GSMUA_Achr5G17060_001 I 0.929
GSMUA_Achr7G23650_001 Musa acuminata GSMUA_Achr7G23650_001 I 0.952
OBART01G39900 Oryza barthii OBART01G39900 I 0.961
OBART05G16760 Oryza barthii OBART05G16760 I 0.953
OBART08G01010 Oryza barthii OBART08G01010 I 0.927
OB01G48600 Oryza brachyantha OB01G48600 I 0.966
OB05G24670 Oryza brachyantha OB05G24670 I 0.953
OB08G11180 Oryza brachyantha OB08G11180 I 0.946
ORGLA01G0337900 Oryza glaberrima ORGLA01G0337900 I 0.966
ORGLA05G0144900 Oryza glaberrima ORGLA05G0144900 I 0.953
ORGLA08G0004000 Oryza glaberrima ORGLA08G0004000 I 0.927
OGLUM01G44090 Oryza glumaepatula OGLUM01G44090 I 0.966
OGLUM05G17770 Oryza glumaepatula OGLUM05G17770 I 0.953
OGLUM08G01070 Oryza glumaepatula OGLUM08G01070 I 0.927
BGIOSGA004950 Oryza indica BGIOSGA004950 I 0.966
BGIOSGA004951 Oryza indica BGIOSGA004951 I 0.958
BGIOSGA018041 Oryza indica BGIOSGA018041 I 0.953
BGIOSGA027877 Oryza indica BGIOSGA027877 I 0.927
OLONG_011893 Oryza longistaminata OLONG_011893 I 0.932
OLONG_025605 Oryza longistaminata OLONG_025605 I 0.964
OMERI05G14550 Oryza meridionalis OMERI05G14550 I 0.953
OMERI08G01230 Oryza meridionalis OMERI08G01230 I 0.927
ONIVA01G44740 Oryza nivara ONIVA01G44740 I 0.961
ONIVA05G17420 Oryza nivara ONIVA05G17420 I 0.953
ONIVA08G01010 Oryza nivara ONIVA08G01010 I 0.927
OPUNC01G38590 Oryza punctata OPUNC01G38590 I 0.966
OPUNC05G14760 Oryza punctata OPUNC05G14760 I 0.953
OPUNC08G00950 Oryza punctata OPUNC08G00950 I 0.927
ORUFI01G43220 Oryza rufipogon ORUFI01G43220 I 0.961
ORUFI05G17970 Oryza rufipogon ORUFI05G17970 I 0.953
ORUFI08G01040 Oryza rufipogon ORUFI08G01040 I 0.927
OS01G0888300 Oryza sativa OS01G0888300 I 0.966
OS05G0418800 Oryza sativa OS05G0418800 I 0.953
Pavir.Fa02204 Panicum virgatum Pavir.Fa02204 N 0.890
Pavir.J00477 Panicum virgatum Pavir.J00477 I 0.944
Pavir.J03312 Panicum virgatum Pavir.J03312 I 0.966
Pavir.J07491 Panicum virgatum Pavir.J07491 I 0.944
PDK_20s1594511g001 Phoenix dactylifera PDK_20s1594511g001 I 0.917
POPTR_0003s03670 Populus trichocarpa POPTR_0003s03670 I 0.961
POPTR_0004s23970 Populus trichocarpa POPTR_0004s23970 I 0.957
Pm003809 Prunus mume Pm003809 I 0.963
PRUPE_ppa021989m2g Prunus persica PRUPE_ppa021989m2g I 0.963
30063.m001417 Ricinus communis 30063.m001417 I 0.961
SapurV1A.0198s0420 Salix purpurea SapurV1A.0198s0420 I 0.957
SapurV1A.0847s0050 Salix purpurea SapurV1A.0847s0050 I 0.953
Si001651m.g Setaria italica Si001651m.g I 0.958
Si013995m.g Setaria italica Si013995m.g N 0.890
Si022103m.g Setaria italica Si022103m.g I 0.944
Solyc01g102740.2 Solanum lycopersicum Solyc01g102740.2 I 0.953
PGSC0003DMG400018262 Solanum tuberosum PGSC0003DMG400018262 I 0.953
Sb03g042210 Sorghum bicolor Sb03g042210 I 0.940
Sb09g020590 Sorghum bicolor Sb09g020590 I 0.944
TCM_027945 Theobroma cacao TCM_027945 I 0.961
Traes_1DL_D79FDE483 Triticum aestivum Traes_1DL_D79FDE483 N 0.878
Traes_3AL_490F09661 Triticum aestivum Traes_3AL_490F09661 I 0.965
TRAES3BF097200010CFD_g Triticum aestivum TRAES3BF097200010CFD_g I 0.953
TRAES3BF098000010CFD_g Triticum aestivum TRAES3BF098000010CFD_g I 0.953
TRAES3BF114300070CFD_g Triticum aestivum TRAES3BF114300070CFD_g I 0.964
TRIUR3_28413 Triticum urartu TRIUR3_28413 I 0.965
TRIUR3_29543 Triticum urartu TRIUR3_29543 I 0.953
ANAC034 Vitis vinifera VIT_12s0035g02020 I 0.913
GRMZM2G134687 Zea mays GRMZM2G134687 I 0.944
GRMZM2G147867 Zea mays GRMZM2G147867 I 0.944
GRMZM5G813651 Zea mays GRMZM5G813651 I 0.927