CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Fb00689
(
Panicum virgatum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Pavir.Fb00689
T298850_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Fb00689.1.p
NAC/NAM
21
139
PPGFRFRPTDEELVVQYLRRKALGVPLPAAVIPVVRDLYSLDPWDIPAAAASLFSSIRSRMPCSVSDDGDADSFRWVIPMQGCSLAQAEGEWVVCRVIQRSSNSNRPRRRATPAGGHAA
Links
Other
NAC/NAM
family TFs
Other
Panicum virgatum
TFs
33 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cmyd_10009563
Chelonia mydas
Cmyd_10009563
N
0.000
D915_08122
Fasciola hepatica
D915_08122
N
0.000
MCOS_0000566101
Mesocestoides corti
MCOS_0000566101
N
0.000
T265_00242
Opisthorchis viverrini
T265_00242
N
0.000
C_01193
Schistosoma haematobium
C_01193
N
0.000
Sjc_0025520
Schistosoma japonicum
Sjc_0025520
N
0.000
Smp_015670
Schistosoma mansoni
Smp_015670
N
0.000
SMRZ_0001688001
Schistosoma margrebowiei
SMRZ_0001688001
N
0.000
SMTD_0000782201
Schistosoma mattheei
SMTD_0000782201
N
0.000
SROB_0000888801
Schistosoma rodhaini
SROB_0000888801
N
0.000
SMU15000156
Schmidtea mediterranea
SMU15000156
N
0.000
TRE_0001588001
Trichobilharzia regenti
TRE_0001588001
N
0.000