Pavir.J00477 (Panicum virgatum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Pavir.J00477 T298918_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC035
M07186_2.00 		Arabidopsis thaliana
CBTNNNNNDYACGKMAHHN
NDDTKMCGTRHNNNNNAVG		 Dap-seq
OMalley et al.(2016)
ANAC034_col 		0.917 0.886
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J00477.1.p NAC/NAM 47 172

Links

Other NAC/NAM family TFs
Other Panicum virgatum TFs

114 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSBTAP00000046628-D1 Bos grunniens ENSBTAP00000046628-D1 N 0.000
POGK Bos taurus ENSBTAG00000010775 N 0.000
ENSCJAG00000033914 Callithrix jacchus ENSCJAG00000033914 I 0.000
POGK Canis familiaris ENSCAFG00000015613 N 0.000
POGK Cavia porcellus ENSCPOG00000026820 N 0.000
ENSCSAG00000010784 Chlorocebus sabaeus ENSCSAG00000010784 N 0.000
POGK Choloepus hoffmanni ENSCHOG00000003466 N 0.000
ENSDORG00000006822 Dipodomys ordii ENSDORG00000006822 N 0.000
POGK Echinops telfairi ENSETEG00000010593 N 0.000
POGK Equus caballus ENSECAG00000003013 N 0.000
ENSEEUG00000004133 Erinaceus europaeus ENSEEUG00000004133 N 0.000
ENSEEUG00000014393 Erinaceus europaeus ENSEEUG00000014393 N 0.000
POGK Felis catus ENSFCAG00000010534 N 0.000
POGK Gorilla gorilla ENSGGOG00000008163 N 0.000
POGK Homo sapiens ENSG00000143157 I 0.000
ENSSTOG00000025009 Ictidomys tridecemlineatus ENSSTOG00000025009 N 0.000
POGK Loxodonta africana ENSLAFG00000009761 N 0.000
ENSP00000356849 Macaca fascicularis ENSP00000356849 N 0.000
POGK Macaca mulatta ENSMMUG00000017789 N 0.000
ENSMEUG00000000171 Macropus eugenii ENSMEUG00000000171 N 0.000
POGK Microcebus murinus ENSMICG00000011758 N 0.000
POGK Monodelphis domestica ENSMODG00000001618 N 0.000
ENSMPUG00000015689 Mustela putorius furo ENSMPUG00000015689 N 0.000
Pogk Mus musculus ENSMUSG00000040596 N 0.000
Myotis_brandtii_POGK_10024358 Myotis brandtii Myotis_brandtii_POGK_10024358 N 0.000
ENSMLUG00000014832 Myotis lucifugus ENSMLUG00000014832 N 0.000
ENSNLEG00000014756 Nomascus leucogenys ENSNLEG00000014756 N 0.000
POGK Ochotona princeps ENSOPRG00000010382 N 0.000
POGK Oryctolagus cuniculus ENSOCUG00000028218 N 0.000
POGK Otolemur garnettii ENSOGAG00000007615 N 0.000
ENSOARG00000011793 Ovis aries ENSOARG00000011793 N 0.000
POGK Pan troglodytes ENSPTRG00000001626 N 0.000
ENSPANG00000013790 Papio anubis ENSPANG00000013790 N 0.000
ENSPPYG00000000558 Pongo abelii ENSPPYG00000000558 N 0.000
POGK Procavia capensis ENSPCAG00000003826 N 0.000
POGK Pteropus vampyrus ENSPVAG00000014118 N 0.000
Pogk Rattus norvegicus ENSRNOG00000032058 N 0.000
ENSSHAG00000018112 Sarcophilus harrisii ENSSHAG00000018112 N 0.000
POGK Sus scrofa ENSSSCG00000006319 N 0.000
ENSTSYG00000011078 Tarsius syrichta ENSTSYG00000011078 N 0.000
POGK Tupaia belangeri ENSTBEG00000012681 N 0.000
POGK Tursiops truncatus ENSTTRG00000015778 N 0.000