Pavir.J05241 (Panicum virgatum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Pavir.J05241 T298941_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK27085.1
M01293_2.00 		Cannabis sativa
AATTTATT
AATAAATT		 PBM
Lambert et al.(2019)
pTH11262 		0.982 0.833
anac075
M07223_2.00 		Arabidopsis thaliana
CTTSWNNNWYAMGYT
ARCKTRWNNNWSAAG		 Dap-seq
OMalley et al.(2016)
ANAC075_col_a 		0.981 0.833
NAC010
M07167_2.00 		Arabidopsis thaliana
NWWNCTTSWNNNWYAMGHHWYH
DRWDDCKTRWNNNWSAAGNWWN		 Dap-seq
OMalley et al.(2016)
SND3_colamp_a 		0.976 0.781
NAC010
M07168_2.00 		Arabidopsis thaliana
CKTSWNNNWYAMGYW
WRCKTRWNNNWSAMG		 Dap-seq
OMalley et al.(2016)
SND3_col_b 		0.976 0.781
NAC073
M07221_2.00 		Arabidopsis thaliana
CTTSWNNNWYAMGYH
DRCKTRWNNNWSAAG		 Dap-seq
OMalley et al.(2016)
SND2_col_a 		0.964 0.798
NAC073
M07222_2.00 		Arabidopsis thaliana
CKTSWNNNWYACGYW
WRCGTRWNNNWSAMG		 Dap-seq
OMalley et al.(2016)
SND2_colamp_a 		0.964 0.798
PK11990.1
M01290_2.00 		Cannabis sativa
DNAHDNHDNN
NNHDNHDTNH		 PBM
Lambert et al.(2019)
pTH11336 		0.927 0.772
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J05241.1.p NAC/NAM 67 206
Pavir.J05241.2.p NAC/NAM 21 160

Links

Other NAC/NAM family TFs
Other Panicum virgatum TFs

358 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BBA_08755 Beauveria bassiana BBA_08755 N 0.000
A1O3_09122 Capronia epimyces A1O3_09122 N 0.000
A1O3_06639 Capronia epimyces A1O3_06639 N 0.000
PV04_08134 Capronia semiimmersa PV04_08134 N 0.000
Z519_01369 Cladophialophora bantiana Z519_01369 N 0.000
G647_02424 Cladophialophora carrionii G647_02424 N 0.000
PV07_11857 Cladophialophora immunda PV07_11857 N 0.000
A1O5_02111 Cladophialophora psammophila A1O5_02111 N 0.000
A1O7_07661 Cladophialophora yegresii A1O7_07661 N 0.000
HMPREF1541_03976 Cyphellophora europaea HMPREF1541_03976 N 0.000
DOTSEDRAFT_71961 Dothistroma septosporum DOTSEDRAFT_71961 N 0.000
A1O9_12701 Exophiala aquamarina A1O9_12701 N 0.000
PV10_08232 Exophiala mesophila PV10_08232 N 0.000
PV06_09975 Exophiala oligosperma PV06_09975 N 0.000
PV11_06930 Exophiala sideris PV11_06930 N 0.000
PV08_08390 Exophiala spinifera PV08_08390 N 0.000
PV05_08566 Exophiala xenobiotica PV05_08566 N 0.000
Z517_03292 Fonsecaea pedrosoi Z517_03292 N 0.000
MANI_018902 Metarhizium anisopliae MANI_018902 N 0.000
MBR_10279 Metarhizium brunneum MBR_10279 N 0.000
MGU_07913 Metarhizium guizhouense MGU_07913 N 0.000
MAJ_09511 Metarhizium majus MAJ_09511 N 0.000
X797_008429 Metarhizium robertsii X797_008429 N 0.000
PMAA_082550 Penicillium marneffei PMAA_082550 N 0.000
PFICI_03421 Pestalotiopsis fici PFICI_03421 N 0.000
MYCFIDRAFT_167080 Pseudocercospora fijiensis MYCFIDRAFT_167080 N 0.000
Z518_06873 Rhinocladiella mackenziei Z518_06873 N 0.000
SEPMUDRAFT_150769 Sphaerulina musiva SEPMUDRAFT_150769 N 0.000
SPBR_02521 Sporothrix brasiliensis SPBR_02521 N 0.000
SPBR_06706 Sporothrix brasiliensis SPBR_06706 N 0.000
HMPREF1624_02633 Sporothrix schenckii HMPREF1624_02633 N 0.000
HMPREF1624_01047 Sporothrix schenckii HMPREF1624_01047 N 0.000
PMAA_082550 Talaromyces marneffei PMAA_082550 N 0.000
TSTA_117390 Talaromyces stipitatus TSTA_117390 N 0.000
PV09_03952 Verruconis gallopava PV09_03952 N 0.000