CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J07259
(
Panicum virgatum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Pavir.J07259
T298946_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J07259.1.p
NAC/NAM
7
133
PPGFRFHPTDVELVSYYLKRKIMGKKLIVDAISEVDLYKFPPWDLPDKSSLRSKDLEWFFFCPRDKKYPNGSRTNRATPNGYWKTSGKDRTIILNSRIVGMKKTLIFHEGKAPKGDRTDWVMYEYKM
Pavir.J07259.2.p
NAC/NAM
7
133
PPGFRFHPTDVELVSYYLKRKIMGKKLIVDAISEVDLYKFPPWDLPDKSSLRSKDLEWFFFCPRDKKYPNGSRTNRATPNGYWKTSGKDRTIILNSRIVGMKKTLIFHEGKAPKGDRTDWVMYEYKM
Pavir.J07259.3.p
NAC/NAM
7
133
PPGFRFHPTDVELVSYYLKRKIMGKKLIVDAISEVDLYKFPPWDLPDKSSLRSKDLEWFFFCPRDKKYPNGSRTNRATPNGYWKTSGKDRTIILNSRIVGMKKTLIFHEGKAPKGDRTDWVMYEYKM
Links
Other
NAC/NAM
family TFs
Other
Panicum virgatum
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
DILT_0000577901
Diphyllobothrium latum
DILT_0000577901
N
0.000
EmuJ_000778700
Echinococcus multilocularis
EmuJ_000778700
N
0.000
ECPE_0001269101
Echinostoma caproni
ECPE_0001269101
N
0.000
D915_11842
Fasciola hepatica
D915_11842
N
0.000
TTAC_0000732001
Hydatigera taeniaeformis
TTAC_0000732001
N
0.000
HDID_0000598801
Hymenolepis diminuta
HDID_0000598801
N
0.000
HmN_000033300
Hymenolepis microstoma
HmN_000033300
N
0.000
HNAJ_0000042001
Hymenolepis nana
HNAJ_0000042001
N
0.000
MCOS_0000679701
Mesocestoides corti
MCOS_0000679701
N
0.000
T265_01358
Opisthorchis viverrini
T265_01358
N
0.000
PXEA_0001247401
Protopolystoma xenopodis
PXEA_0001247401
N
0.000
SSLN_0000459001
Schistocephalus solidus
SSLN_0000459001
N
0.000
SCUD_0001455301
Schistosoma curassoni
SCUD_0001455301
N
0.000
A_03828
Schistosoma haematobium
A_03828
N
0.000
Sjc_0067240
Schistosoma japonicum
Sjc_0067240
N
0.000
Smp_049160
Schistosoma mansoni
Smp_049160
N
0.000
SMRZ_0001877501
Schistosoma margrebowiei
SMRZ_0001877501
N
0.000
SMTD_0001334601
Schistosoma mattheei
SMTD_0001334601
N
0.000
SROB_0001082601
Schistosoma rodhaini
SROB_0001082601
N
0.000
SPER_0000847701
Spirometra erinaceieuropaei
SPER_0000847701
N
0.000
TASK_0000020501
Taenia asiatica
TASK_0000020501
N
0.000
TsM_000748400
Taenia solium
TsM_000748400
N
0.000
TRE_0001157701
Trichobilharzia regenti
TRE_0001157701
N
0.000