CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBN14151
(
Caenorhabditis brenneri
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
CBN14151
T301759_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
XP_002647782.1
M02420_2.00
Caenorhabditis briggsae
NYGTAGYN
NRCTACRN
PBM
Weirauch et al.(2014)
pTH5737
0.899
0.671
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBN14151
Nuclear receptor
4
74
GNCKVCDSPNATNFHFGAHSCKACAAFFRRTVKTGQTYICAGDDSCEINHAFRQNCRQCRLAKCQRAGMKD
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis brenneri
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
csin102325
Clonorchis sinensis
csin102325
N
ECANG7_07497
Echinococcus canadensis
ECANG7_07497
N
EmuJ_000935000
Echinococcus multilocularis
EmuJ_000935000
N
TTAC_0001091801
Hydatigera taeniaeformis
TTAC_0001091801
N
HDID_0000709101
Hymenolepis diminuta
HDID_0000709101
N
HmN_000642800
Hymenolepis microstoma
HmN_000642800
N
HNAJ_0001003001
Hymenolepis nana
HNAJ_0001003001
N
MCOS_0000031601
Mesocestoides corti
MCOS_0000031601
N
T265_13929
Opisthorchis viverrini
T265_13929
N
SSLN_0002013301
Schistocephalus solidus
SSLN_0002013301
N
SCUD_0000119901
Schistosoma curassoni
SCUD_0000119901
N
A_03251
Schistosoma haematobium
A_03251
N
Smp_128060
Schistosoma mansoni
Smp_128060
N
SMU15024754
Schmidtea mediterranea
SMU15024754
N
SPER_0003277501
Spirometra erinaceieuropaei
SPER_0003277501
N
TsM_000951300
Taenia solium
TsM_000951300
N