CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBN15481
(
Caenorhabditis brenneri
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
CBN15481
T301771_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-1
M00686_2.00
Caenorhabditis elegans
ARTGATCA
TGATCAYT
PBM
Narasimhan et al.(2015)
pTH9322
0.896
0.686
nhr-49
M02413_2.00
Caenorhabditis elegans
NNNNWNHAN
NTDNWNNNN
PBM
Weirauch et al.(2014)
pTH5891
0.882
0.571
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBN15481
Nuclear receptor
9
78
TLCAVCEDVATGKHYSVASCNGCKTFFRRALVNNREFICQGNKDCPVNKGVRCACRYCRLQKCLAVGMDK
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis brenneri
TFs
221 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AALB008766
Anopheles albimanus
AALB008766
N
AARA005329
Anopheles arabiensis
AARA005329
N
AATE014848
Anopheles atroparvus
AATE014848
N
ACHR002760
Anopheles christyi
ACHR002760
N
ACOM029741
Anopheles coluzzii
ACOM029741
N
ACUA021302
Anopheles culicifacies
ACUA021302
N
ADAC000800
Anopheles darlingi
ADAC000800
N
ADIR005439
Anopheles dirus
ADIR005439
N
AFUN005913
Anopheles funestus
AFUN005913
N
AGAP004377
Anopheles gambiae
AGAP004377
N
AMAM015125
Anopheles maculatus
AMAM015125
N
AMEC020121
Anopheles melas
AMEC020121
N
AMEM007048
Anopheles merus
AMEM007048
N
AMIN004769
Anopheles minimus
AMIN004769
N
AQUA008447
Anopheles quadriannulatus
AQUA008447
N
ASTEI08701
Anopheles stephensi
ASTEI08701
N