CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GL17752
(
Drosophila persimilis
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
FBgn0155355
T305400_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GA30480
M02409_2.00
Drosophila pseudoobscura
RAGATCAM
KTGATCTY
PBM
Weirauch et al.(2014)
pTH5877
0.989
1.000
Hr51
M06432_2.00
Drosophila melanogaster
AMRDATCARARGW
WCYTYTGATHYKT
B1H
Zhu et al.(2011)
Hr51_SANGER_5_FBgn0034012
0.989
0.986
NR2E3
M00373_2.00
Homo sapiens
NRAGATCAMN
NKTGATCTYN
PBM
Barrera et al.(2016)
NR2E3_REF
0.977
0.843
Nr2e3
M02708_2.00
Mus musculus
AAGCTTD
HAAGCTT
SELEX
Mathelier et al.(2014)
MA0164.1
0.977
0.843
Nr2e3
M09328_2.00
Mus musculus
NAAGTCAAAARKCA
TGMYTTTTGACTTN
Misc
Kulakovskiy et al.(2013)
NR2E3_MOUSE.H11MO.0.C
0.977
0.843
NR2E3
M00372_2.00
Homo sapiens
AAAGATCA
TGATCTTT
PBM
Barrera et al.(2016)
NR2E3_R77Q
0.977
0.829
NR2E3
M00370_2.00
Homo sapiens
NNNWRABATCANN
NNTGATVTYWNNN
PBM
Barrera et al.(2016)
NR2E3_R76Q
0.973
0.829
NR2E3
M00371_2.00
Homo sapiens
NNNHAATWTRTNN
NNAYAWATTDNNN
PBM
Barrera et al.(2016)
NR2E3_R76W
0.969
0.829
NR2E3
M00369_2.00
Homo sapiens
NGGGRTCAHN
NDTGAYCCCN
PBM
Barrera et al.(2016)
NR2E3_G56R
0.963
0.829
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0181859
Nuclear receptor
154
224
LICVVCGDTSSGKHYGILACNGCSGFFKRSVRRKLIYRCQAGTGRCIVDKAHRNQCQACRLKKCLQMGMNK
Links
Other
Nuclear receptor
family TFs
Other
Drosophila persimilis
TFs
195 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMXG00000000511
Astyanax mexicanus
ENSAMXG00000000511
N
NCOA2
Callithrix jacchus
ENSCJAG00000007974
N
ncoa2
Danio rerio
ENSDARG00000017929
N
ENSGMOG00000016251
Gadus morhua
ENSGMOG00000016251
N
ENSGALG00000015607
Gallus gallus
ENSGALG00000015607
N
ncoa2
Gasterosteus aculeatus
ENSGACG00000002822
N
ENSLACG00000017459
Latimeria chalumnae
ENSLACG00000017459
N
ENSLOCG00000004079
Lepisosteus oculatus
ENSLOCG00000004079
N
ENSMPUG00000010618
Mustela putorius furo
ENSMPUG00000010618
N
Ncoa2
Mus musculus
ENSMUSG00000005886
N
ENSONIG00000014253
Oreochromis niloticus
ENSONIG00000014253
N
ENSOANG00000031726
Ornithorhynchus anatinus
ENSOANG00000031726
N
ncoa2
Oryzias latipes
ENSORLG00000008098
N
ENSOGAG00000025735
Otolemur garnettii
ENSOGAG00000025735
N
ENSPFOG00000011859
Poecilia formosa
ENSPFOG00000011859
N
ENSSSCG00000021133
Sus scrofa
ENSSSCG00000021133
N
ncoa2
Takifugu rubripes
ENSTRUG00000011789
N
ncoa2
Tetraodon nigroviridis
ENSTNIG00000008193
N