GA30480 (Drosophila pseudoobscura)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 FBgn0264774 T305523_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GA30480
M02409_2.00		 Drosophila pseudoobscura
RAGATCAM
KTGATCTY		 PBM
Weirauch et al.(2014)
pTH5877		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hr51
M06432_2.00 		Drosophila melanogaster
AMRDATCARARGW
WCYTYTGATHYKT		 B1H
Zhu et al.(2011)
Hr51_SANGER_5_FBgn0034012 		0.989 0.986
NR2E3
M00373_2.00 		Homo sapiens
NRAGATCAMN
NKTGATCTYN		 PBM
Barrera et al.(2016)
NR2E3_REF 		0.977 0.843
Nr2e3
M02708_2.00 		Mus musculus
AAGCTTD
HAAGCTT		 SELEX
Mathelier et al.(2014)
MA0164.1 		0.977 0.843
Nr2e3
M09328_2.00 		Mus musculus
NAAGTCAAAARKCA
TGMYTTTTGACTTN		 Misc
Kulakovskiy et al.(2013)
NR2E3_MOUSE.H11MO.0.C 		0.977 0.843
NR2E3
M00372_2.00 		Homo sapiens
AAAGATCA
TGATCTTT		 PBM
Barrera et al.(2016)
NR2E3_R77Q 		0.977 0.829
NR2E3
M00370_2.00 		Homo sapiens
NNNWRABATCANN
NNTGATVTYWNNN		 PBM
Barrera et al.(2016)
NR2E3_R76Q 		0.973 0.829
NR2E3
M00371_2.00 		Homo sapiens
NNNHAATWTRTNN
NNAYAWATTDNNN		 PBM
Barrera et al.(2016)
NR2E3_R76W 		0.969 0.829
NR2E3
M00369_2.00 		Homo sapiens
NGGGRTCAHN
NDTGAYCCCN		 PBM
Barrera et al.(2016)
NR2E3_G56R 		0.963 0.829
For this family, TFs with SR scores > 0.745 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02409_2.00 Nuclear receptor 1 71

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0308068 Nuclear receptor 151 221

Links

Other Nuclear receptor family TFs
Other Drosophila pseudoobscura TFs

195 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
FFUJ_06532 Fusarium fujikuroi FFUJ_06532 N
FGRRES_08138 Fusarium graminearum FGRRES_08138 N
FOXG_02824 Fusarium oxysporum FOXG_02824 N
FPSE_05461 Fusarium pseudograminearum FPSE_05461 N
NechaG99472 Fusarium solani NechaG99472 N
FVEG_01655 Fusarium verticillioides FVEG_01655 N
MAC_01549 Metarhizium acridum MAC_01549 N
MANI_000159 Metarhizium anisopliae MANI_000159 N
MBR_02714 Metarhizium brunneum MBR_02714 N
MAJ_02483 Metarhizium majus MAJ_02483 N
MAJ_11289 Metarhizium majus MAJ_11289 N
X797_000761 Metarhizium robertsii X797_000761 N
estExt_fgenesh1_pg.C_sca_44_chr3_2_00042 Nectria haematococca estExt_fgenesh1_pg.C_sca_44_chr3_2_00042 N
VHEMI00062 Torrubiella hemipterigena VHEMI00062 N