CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
nhr-66
(
Caenorhabditis elegans
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
WBGene00003656
T306180_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-66
M00694_2.00
Caenorhabditis elegans
NNNNYRTABY
RVTAYRNNNN
PBM
Narasimhan et al.(2015)
pTH10034
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.745
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M00694_2.00
Nuclear receptor
51
122
PACAICGTDSTGIHFGVDACAACSAFFRRTVVLNKDYSCNKGGKCTVVKDGSAGQKCRACRFRKCISSGMDK
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
T09A12.4a
Nuclear receptor
111
182
PACAICGTDSTGIHFGVDACAACSAFFRRTVVLNKDYSCNKGGKCTVVKDGSAGQKCRACRFRKCISSGMDK
T09A12.4b
Nuclear receptor
60
131
PACAICGTDSTGIHFGVDACAACSAFFRRTVVLNKDYSCNKGGKCTVVKDGSAGQKCRACRFRKCISSGMDK
T09A12.4c
Nuclear receptor
267
338
PACAICGTDSTGIHFGVDACAACSAFFRRTVVLNKDYSCNKGGKCTVVKDGSAGQKCRACRFRKCISSGMDK
T09A12.4d
Nuclear receptor
193
264
PACAICGTDSTGIHFGVDACAACSAFFRRTVVLNKDYSCNKGGKCTVVKDGSAGQKCRACRFRKCISSGMDK
T09A12.4e
Nuclear receptor
53
124
PACAICGTDSTGIHFGVDACAACSAFFRRTVVLNKDYSCNKGGKCTVVKDGSAGQKCRACRFRKCISSGMDK
T09A12.4f
Nuclear receptor
265
336
PACAICGTDSTGIHFGVDACAACSAFFRRTVVLNKDYSCNKGGKCTVVKDGSAGQKCRACRFRKCISSGMDK
T09A12.4g
Nuclear receptor
191
262
PACAICGTDSTGIHFGVDACAACSAFFRRTVVLNKDYSCNKGGKCTVVKDGSAGQKCRACRFRKCISSGMDK
T09A12.4h
Nuclear receptor
113
184
PACAICGTDSTGIHFGVDACAACSAFFRRTVVLNKDYSCNKGGKCTVVKDGSAGQKCRACRFRKCISSGMDK
T09A12.4i
Nuclear receptor
51
122
PACAICGTDSTGIHFGVDACAACSAFFRRTVVLNKDYSCNKGGKCTVVKDGSAGQKCRACRFRKCISSGMDK
T09A12.4j
Nuclear receptor
62
133
PACAICGTDSTGIHFGVDACAACSAFFRRTVVLNKDYSCNKGGKCTVVKDGSAGQKCRACRFRKCISSGMDK
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis elegans
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MANI_026405
Metarhizium anisopliae
MANI_026405
N
MBR_10526
Metarhizium brunneum
MBR_10526
N
MGU_10452
Metarhizium guizhouense
MGU_10452
N