Afo_R009341 (Aptenodytes forsteri)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 Afo_R009341 T306493_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NR2E1
M02394_2.00 		Homo sapiens
NGAGGTCARN
NYTGACCTCN		 PBM
Weirauch et al.(2014)
pTH6281 		0.794 0.786
Nr2e1
M00814_2.00 		Mus musculus
NNNGTYRNNN
NNNYRACNNN		 PBM
Weirauch et al.(2013)
pTH2936 		0.794 0.786
A1YGC6_PANPA
M02421_2.00 		Pan paniscus
NNGTCANNN
NNNTGACNN		 PBM
Weirauch et al.(2014)
pTH5561 		0.794 0.786
NR2E1
M03364_2.00 		Homo sapiens
WDAAGTCAA
TTGACTTHW		 SELEX
Jolma et al.(2013)
NR2E1_1 		0.794 0.786
NR2E1
M03365_2.00 		Homo sapiens
RARTCAWDAAGTCA
TGACTTHWTGAYTY		 SELEX
Jolma et al.(2013)
NR2E1_2 		0.794 0.786
Nr2e1
M03427_2.00 		Mus musculus
WDAAGTCAW
WTGACTTHW		 SELEX
Jolma et al.(2013)
Nr2e1_1 		0.794 0.786
Nr2e1
M03428_2.00 		Mus musculus
RRGTCAWDAAGTCA
TGACTTHWTGACYY		 SELEX
Jolma et al.(2013)
Nr2e1_2 		0.794 0.786
NR2E1
M05585_2.00 		Homo sapiens
NNAAGTCAN
NTGACTTNN		 SELEX
Yin et al.(2017)
NR2E1_FL_HT-SELEX 		0.794 0.786
NR2E1
M05586_2.00 		Homo sapiens
NDAAGTCAN
NTGACTTHN		 SELEX
Yin et al.(2017)
NR2E1_FL_Methyl-HT-SELEX 		0.794 0.786
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Afo_R009341 Nuclear receptor 13 68

Links

Other Nuclear receptor family TFs
Other Aptenodytes forsteri TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI31510 Acyrthosiphon pisum ACYPI31510 I
ACYPI31512 Acyrthosiphon pisum ACYPI31512 I
ENSAMEG00000015014 Ailuropoda melanoleuca ENSAMEG00000015014 I
ANCCEY_04739 Ancylostoma ceylanicum ANCCEY_04739 I
ANCDUO_13968 Ancylostoma duodenale ANCDUO_13968 I
ACAC_0000050701 Angiostrongylus cantonensis ACAC_0000050701 I
ACOC_0000924001 Angiostrongylus costaricensis ACOC_0000924001 I
AATE018011 Anopheles atroparvus AATE018011 I
AATE000335 Anopheles atroparvus AATE000335 I
ACOM027979 Anopheles coluzzii ACOM027979 I
AFAF001557 Anopheles farauti AFAF001557 I
AFAF020264 Anopheles farauti AFAF020264 I
AMAM009924 Anopheles maculatus AMAM009924 I
AMAM003778 Anopheles maculatus AMAM003778 I
ASU_06642 Ascaris suum ASU_06642 I
ACEP14857 Atta cephalotes ACEP14857 I
ENSBTAG00000003540 Bos taurus ENSBTAG00000003540 I
BXY_0842900 Bursaphelenchus xylophilus BXY_0842900 I
CBN09920 Caenorhabditis brenneri CBN09920 I
CBN18838 Caenorhabditis brenneri CBN18838 I
ztf-11 Caenorhabditis elegans WBGene00009939 D
CJA03417 Caenorhabditis japonica CJA03417 I
CRE08084 Caenorhabditis remanei CRE08084 I
Cmyd_10014184 Chelonia mydas Cmyd_10014184 I
YQE_11977 Dendroctonus ponderosae YQE_11977 I
DICVIV_01967 Dictyocaulus viviparus DICVIV_01967 I
nDi.2.2.2.g06992 Dirofilaria immitis nDi.2.2.2.g06992 I
CG43689 Drosophila melanogaster FBgn0263772 I
GI16394 Drosophila mojavensis FBgn0139142 I
GL14771 Drosophila persimilis FBgn0152375 I
EVEC_0001307101 Enterobius vermicularis EVEC_0001307101 I
HHAL001110-PA Halyomorpha halys HHAL001110-PA I
Hba_17025 Heterorhabditis bacteriophora Hba_17025 I
MYT1L Homo sapiens ENSG00000186487 I
ST18 Homo sapiens ENSG00000147488 I
ISCW018799 Ixodes scapularis ISCW018799 I
ENSLACG00000008399 Latimeria chalumnae ENSLACG00000008399 I
nLs.2.1.2.g09672 Litomosoides sigmodontis nLs.2.1.2.g09672 I
LCUP002242 Lucilia cuprina LCUP002242 I
MYT1L Macaca mulatta ENSMMUG00000009310 I
Minc05804 Meloidogyne incognita Minc05804 I
NECAME_10938 Necator americanus NECAME_10938 I
NBR_0001165301 Nippostrongylus brasiliensis NBR_0001165301 I
Ocbimv22028296m.g Octopus bimaculoides Ocbimv22028296m.g N
OESDEN_24201 Oesophagostomum dentatum OESDEN_24201 I
WBGene00238210 Onchocerca volvulus WBGene00238210 I
PTRK_0001788400 Parastrongyloides trichosuri PTRK_0001788400 I
RSKR_0000214800 Rhabditophanes kr3021 RSKR_0000214800 I
SMU15028607 Schmidtea mediterranea SMU15028607 I
SMU15021651 Schmidtea mediterranea SMU15021651 N
L596_g1281 Steinernema carpocapsae L596_g1281 I
L889_g28085 Steinernema feltiae L889_g28085 I
L893_g1446 Steinernema glaseri L893_g1446 I
SPAL_0000489100 Strongyloides papillosus SPAL_0000489100 I
SPAL_0000892700 Strongyloides papillosus SPAL_0000892700 I
SSTP_0000574400 Strongyloides stercoralis SSTP_0000574400 I
SVE_1952800 Strongyloides venezuelensis SVE_1952800 I
SVE_1935100 Strongyloides venezuelensis SVE_1935100 I
SMUV_0000666101 Syphacia muris SMUV_0000666101 I
ENSTGUG00000014218 Taeniopygia guttata ENSTGUG00000014218 I
TELCIR_22038 Teladorsagia circumcincta TELCIR_22038 I
TELCIR_26151 Teladorsagia circumcincta TELCIR_26151 I