BGLB001483 (Biomphalaria glabrata)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 BGLB001483 T307779_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
sex-1
M02416_2.00 		Caenorhabditis elegans
RAGGTCAH
DTGACCTY		 PBM
Weirauch et al.(2014)
pTH5667 		0.789 0.529
CBG17178
M02392_2.00 		Caenorhabditis briggsae
RAGGTCAH
DTGACCTY		 PBM
Weirauch et al.(2014)
pTH6634 		0.779 0.543
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGLB001483-PA Nuclear receptor 564 633

Links

Other Nuclear receptor family TFs
Other Biomphalaria glabrata TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ASU_10228 Ascaris suum ASU_10228 I 0.747
BGLB008862 Biomphalaria glabrata BGLB008862 I 0.754
BGIBMGA003895 Bombyx mori BGIBMGA003895 I 0.750
estExt_fgenesh2_pg.C_2760032 Branchiostoma floridae estExt_fgenesh2_pg.C_2760032 I 0.772
estExt_fgenesh2_kg.C_120001 Branchiostoma floridae estExt_fgenesh2_kg.C_120001 I 0.772
CBN13485 Caenorhabditis brenneri CBN13485 I 0.813
CBG17178 Caenorhabditis briggsae CBG17178 D 0.779
sex-1 Caenorhabditis elegans WBGene00004786 D 0.789
CJA05280 Caenorhabditis japonica CJA05280 I 0.758
CRE22690 Caenorhabditis remanei CRE22690 I 0.761
CapteG168520 Capitella teleta CapteG168520 I 0.770
KGM_08788 Danaus plexippus KGM_08788 I 0.750
EVEC_0000729501 Enterobius vermicularis EVEC_0000729501 I 0.756
HMEL017935 Heliconius melpomene HMEL017935 I 0.750
HelroG90741 Helobdella robusta HelroG90741 I 0.755
LLOJ003472 Lutzomyia longipalpis LLOJ003472 I 0.750
SPAL_0001622300 Strongyloides papillosus SPAL_0001622300 I 0.793
SSTP_0000141900 Strongyloides stercoralis SSTP_0000141900 I 0.793
SVE_0444400 Strongyloides venezuelensis SVE_0444400 I 0.793
SMUV_0001106701 Syphacia muris SMUV_0001106701 I 0.752
rarg.S Xenopus laevis XB-GENE-865050 I 0.767
rarg Xenopus tropicalis XB-GENE-484127 I 0.767
XP_002936680 Xenopus tropicalis XP_002936680 I 0.767