CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ASU_04305
(
Ascaris suum
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
ASU_04305
T308160_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-7
M00689_2.00
Caenorhabditis elegans
WAAGAYCAN
NTGRTCTTW
PBM
Narasimhan et al.(2015)
pTH10645
0.850
0.671
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ASU_04305
Nuclear receptor
117
186
AICAVCGDGHAKLHYGVLACYGCKGFFRRTLTGKYRYVCRFGNNCIVDKYQRNSCRYCRFQRCLEVGMDP
Links
Other
Nuclear receptor
family TFs
Other
Ascaris suum
TFs
135 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACHR008952
Anopheles christyi
ACHR008952
I
AEPI008594
Anopheles epiroticus
AEPI008594
I
CADAORAG00001436
Aspergillus oryzae
CADAORAG00001436
I
e_gw.291.69.1
Branchiostoma floridae
e_gw.291.69.1
I
Tead3
Dipodomys ordii
ENSDORG00000010798
I
TEAD1
Microcebus murinus
ENSMICG00000007178
I
PPAI001408
Phlebotomus papatasi
PPAI001408
I